RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 MTMR11A4FU01 709 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 VNN2O95498 520 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 OR4Q2P0C623 313 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 GJA1P17302 382 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 CXCL12P48061 93 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 KPNA1P52294 538 aaPredicted RBP16.16■□□□□ 0.18
ITM2C-208ENST00000541852 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
ITM2C-208ENST00000541852 TAF12Q16514 161 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 DGKKQ5KSL6 1271 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 ZNF720Q7Z2F6 126 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 RALGPS2Q86X27 583 aaPredicted RBP16.16■□□□□ 0.18
ITM2C-208ENST00000541852 TMC8Q8IU68 726 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 ATAD1Q8NBU5 361 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 SPPL2BQ8TCT7 592 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 GCNAQ96QF7 691 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 DNAJC25Q9H1X3 360 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 THG1LQ9NWX6 298 aaKnown RBP16.16■□□□□ 0.18
ITM2C-208ENST00000541852 STK17AQ9UEE5 414 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 EXOC7Q9UPT5 735 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 SLC27A5Q9Y2P5 690 aa16.16■□□□□ 0.18
ITM2C-208ENST00000541852 SOBPA7XYQ1 873 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 ARNTLO00327 626 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 CYB561D2O14569 222 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 IL18RAPO95256 599 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 CHRNB1P11230 501 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 CDC25CP30307 473 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 CNR2P34972 360 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 PNPLA4P41247 253 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 TAF6P49848 677 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 KARSQ15046 597 aaKnown RBP16.15■□□□□ 0.18
ITM2C-208ENST00000541852 DCP1BQ8IZD4 617 aaKnown RBP16.15■□□□□ 0.18
ITM2C-208ENST00000541852 SYNPOQ8N3V7 929 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 SPEM1Q8N4L4 309 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 DCLK2Q8N568 766 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 FAM200AQ8TCP9 573 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 CACTINQ8WUQ7 758 aaKnown RBP16.15■□□□□ 0.18
ITM2C-208ENST00000541852 FIZ1Q96SL8 496 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 ZCWPW1Q9H0M4 648 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 TASP1Q9H6P5 420 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 DPP3Q9NY33 737 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 GMEB2Q9UKD1 530 aa16.15■□□□□ 0.18
ITM2C-208ENST00000541852 SMG5Q9UPR3 1016 aaKnown RBP16.15■□□□□ 0.18
ITM2C-208ENST00000541852 LDHAP00338 332 aaKnown RBP16.14■□□□□ 0.17
ITM2C-208ENST00000541852 GAP43P17677 238 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 CCNE1P24864 410 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 GABRR2P28476 465 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 NMT1P30419 496 aaKnown RBP16.14■□□□□ 0.17
ITM2C-208ENST00000541852 TXLNAP40222 546 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 ACOT2P49753 483 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 GUCY2FP51841 1108 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 LMNB2Q03252 620 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 SV2CQ496J9 727 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 GPR158Q5T848 1215 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 SLC39A4Q6P5W5 647 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 GAREM2Q75VX8 874 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 POMGNT1Q8WZA1 660 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 CRISPLD1Q9H336 500 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
ITM2C-208ENST00000541852 GPR179Q6PRD1 2367 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 CEP250Q9BV73 2442 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 MYBPHLA2RUH7 354 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 ANKRD63C9JTQ0 380 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 LRP3O75074 770 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 PAPSS2O95340 614 aaPredicted RBP16.13■□□□□ 0.17
ITM2C-208ENST00000541852 NFICP08651 508 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 DDX6P26196 483 aaKnown RBP eCLIP16.13■□□□□ 0.17
ITM2C-208ENST00000541852 AMPD2Q01433 879 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 ALCAMQ13740 583 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 MGAT5BQ3V5L5 792 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 SLC39A12Q504Y0 691 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 RRAGBQ5VZM2 374 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 TSSK4Q6SA08 328 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 SV2BQ7L1I2 683 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 BPIFB1Q8TDL5 484 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 ZNF560Q96MR9 790 aa16.13■□□□□ 0.17
ITM2C-208ENST00000541852 PYM1Q9BRP8 204 aaKnown RBP16.13■□□□□ 0.17
ITM2C-208ENST00000541852 SRPRBQ9Y5M8 271 aaKnown RBP16.13■□□□□ 0.17
ITM2C-208ENST00000541852 KPNA7A9QM74 516 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 NRG2O14511 850 aaPredicted RBP16.12■□□□□ 0.17
ITM2C-208ENST00000541852 PPEF2O14830 753 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 FOXD2O60548 495 aaPredicted RBP16.12■□□□□ 0.17
ITM2C-208ENST00000541852 TDGF1P13385 188 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 HOXA6P31267 233 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 NFE2Q16621 373 aaPredicted RBP16.12■□□□□ 0.17
ITM2C-208ENST00000541852 RSPO4Q2I0M5 234 aaPredicted RBP16.12■□□□□ 0.17
ITM2C-208ENST00000541852 ZC2HC1CQ53FD0 456 aaPredicted RBP16.12■□□□□ 0.17
ITM2C-208ENST00000541852 LAIR1Q6GTX8 287 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 OR10T2Q8NGX3 314 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 SPATA18Q8TC71 538 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 EXOC4Q96A65 974 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 ACCSQ96QU6 501 aa16.12■□□□□ 0.17
ITM2C-208ENST00000541852 SEPT5Q99719 369 aaPredicted RBP16.12■□□□□ 0.17
ITM2C-208ENST00000541852 MRPL44Q9H9J2 332 aaKnown RBP16.12■□□□□ 0.17
ITM2C-208ENST00000541852 SPECC1L-ADORA2AF8WAN1 911 aa16.11■□□□□ 0.17
ITM2C-208ENST00000541852 CD2BP2O95400 341 aaKnown RBP16.11■□□□□ 0.17
ITM2C-208ENST00000541852 HAPLN1P10915 354 aaPredicted RBP16.11■□□□□ 0.17
ITM2C-208ENST00000541852 TSPY1Q01534 308 aa16.11■□□□□ 0.17
ITM2C-208ENST00000541852 LRRC15Q8TF66 581 aa16.11■□□□□ 0.17
ITM2C-208ENST00000541852 EPSTI1Q96J88 318 aa16.11■□□□□ 0.17
ITM2C-208ENST00000541852 TMEM209Q96SK2 561 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms