RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 C1orf127Q8N9H9 656 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 RABGGTAQ92696 567 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 CGRRF1Q99675 332 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 GPR62Q9BZJ7 368 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 TMEM8AQ9HCN3 771 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 RRAGDQ9NQL2 400 aaPredicted RBP11.38□□□□□ -0.59
ATL3-204ENST00000540699 SPTLC3Q9NUV7 552 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 DPP3Q9NY33 737 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 COQ4Q9Y3A0 265 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 DAAM1Q9Y4D1 1078 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
ATL3-204ENST00000540699 PPEF2O14830 753 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 TADA2AO75478 443 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 B3GAT3O94766 335 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 UCHL3P15374 230 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 GCLMP48507 274 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 AP3M2P53677 418 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 POLR2FP61218 127 aaKnown RBP11.37□□□□□ -0.59
ATL3-204ENST00000540699 CDK17Q00537 523 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 COL19A1Q14993 1142 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 DUOXA2Q1HG44 320 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 TIGD5Q53EQ6 642 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 KIAA0319Q5VV43 1072 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 TRIM65Q6PJ69 517 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 RAD9BQ6WBX8 426 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 USP37Q86T82 979 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 TMTC1Q8IUR5 882 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 VPS52Q8N1B4 723 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 C17orf53Q8N3J3 647 aaPredicted RBP11.37□□□□□ -0.59
ATL3-204ENST00000540699 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 OR5B17Q8NGF7 314 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 ZNF516Q92618 1163 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 CCDC127Q96BQ5 260 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 SUSD3Q96L08 255 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 TCF25Q9BQ70 676 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 INTS2Q9H0H0 1204 aaKnown RBP11.37□□□□□ -0.59
ATL3-204ENST00000540699 UBE2ZQ9H832 354 aaPredicted RBP11.37□□□□□ -0.59
ATL3-204ENST00000540699 NGRNQ9NPE2 291 aaKnown RBP11.37□□□□□ -0.59
ATL3-204ENST00000540699 AJAP1Q9UKB5 411 aaPredicted RBP11.37□□□□□ -0.59
ATL3-204ENST00000540699 ITGA11Q9UKX5 1188 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 FHOD1Q9Y613 1164 aa11.37□□□□□ -0.59
ATL3-204ENST00000540699 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 C2orf71A6NGG8 1288 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 SOWAHDA6NJG2 315 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 LRRC53A6NM62 1247 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 M0QZQ0 153 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 TRAPPC3O43617 180 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 C4BPAP04003 597 aaKnown RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 FGFR3P22607 806 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 JAM2P57087 298 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 LILRA4P59901 499 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 TFAMQ00059 246 aaKnown RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 DSG1Q02413 1049 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 SMC1AQ14683 1233 aaKnown RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 PTPN14Q15678 1187 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 USP41Q3LFD5 358 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 KRT39Q6A163 491 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 IQCEQ6IPM2 695 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 CYP26C1Q6V0L0 522 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 TAS1R1Q7RTX1 841 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 LRRC52Q8N7C0 313 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 MRPL43Q8N983 215 aaKnown RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 ZNF397Q8NF99 534 aaPredicted RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 HASPINQ8TF76 798 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 SYN2Q92777 582 aaPredicted RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 ANKRD36BP1Q96IX9 119 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 FAM84AQ96KN4 292 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 FNBP1Q96RU3 617 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 POP1Q99575 1024 aaKnown RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 CHP1Q99653 195 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 NSUN3Q9H649 340 aaKnown RBP11.36□□□□□ -0.59
ATL3-204ENST00000540699 NLRC4Q9NPP4 1024 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 SIX4Q9UIU6 781 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 MYO6Q9UM54 1294 aa11.36□□□□□ -0.59
ATL3-204ENST00000540699 PI4K2BG5E9Z4 385 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 SYN3O14994 580 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 SPTLC1O15269 473 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 LRRN2O75325 713 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 TNNC2P02585 160 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 ITGB3P05106 788 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 TMEM191BP0C7N4 346 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 DLATP10515 647 aaKnown RBP11.35□□□□□ -0.59
ATL3-204ENST00000540699 TNNI1P19237 187 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 RFX1P22670 979 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 PNPLA4P41247 253 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 BRCC3P46736 316 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 GLUD2P49448 558 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 MTF1Q14872 753 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 LEXMQ3ZCV2 418 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 ZACNQ401N2 412 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 RTP2Q5QGT7 225 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 FAM171A1Q5VUB5 890 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 LMBRD2Q68DH5 695 aaPredicted RBP11.35□□□□□ -0.59
ATL3-204ENST00000540699 SCARA3Q6AZY7 606 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 GJB7Q6PEY0 223 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 SV2AQ7L0J3 742 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 RRAGAQ7L523 313 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 TRAPPC11Q7Z392 1133 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms