RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 NACC1Q96RE7 527 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 IFT122Q9HBG6 1241 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 SUCLA2Q9P2R7 463 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 KIAA1024Q9UPX6 916 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 GIT1Q9Y2X7 761 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 NOTCH4Q99466 2003 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 CELSR3Q9NYQ7 3312 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 KALRNO60229 2985 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 SPAARA0A1B0GVQ0 90 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 E9PMD0 336 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 SPECC1L-ADORA2AF8WAN1 911 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 J3QKU1 62 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 C1QL1O75973 258 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 PRB1P04280 392 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 MARCKSP29966 332 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 CTHP32929 405 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 OR1D2P34982 312 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 MLH1P40692 756 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 RFC5P40937 340 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 GCGRP47871 477 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 NASPP49321 788 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 IRX4P78413 519 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 HNRNPDQ14103 355 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 HSP90AA2PQ14568 343 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 SLC39A14Q15043 492 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 KMT5BQ4FZB7 885 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 HYIQ5T013 277 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 FAM171A1Q5VUB5 890 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 USP49Q70CQ1 688 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 KCNK18Q7Z418 384 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 CEP57Q86XR8 500 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 YAF2Q8IY57 180 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 RDH13Q8NBN7 331 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 SNX29Q8TEQ0 813 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 LRRC15Q8TF66 581 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 ZFP42Q96MM3 310 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 HNRNPABQ99729 332 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 JPH2Q9BR39 696 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 GPR88Q9GZN0 384 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 DDX19AQ9NUU7 478 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 EVLQ9UI08 416 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 FBXO2Q9UK22 296 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 PPME1Q9Y570 386 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 IPPQ9Y573 584 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 URB1O60287 2271 aaKnown RBP9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 CACNA1EQ15878 2313 aa9.7□□□□□ -0.86
TRAPPC1-202ENST00000540486 ARHGEF37A1IGU5 675 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 CAPN8A6NHC0 703 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 SLC38A8A6NNN8 435 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 HEPACAM2A8MVW5 462 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 NRG2O14511 850 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 MEFVO15553 781 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 ADAM12O43184 909 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 DGAT1O75907 488 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 BMP15O95972 392 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 APC2O95996 2303 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 LRG1P02750 347 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 ARL2P36404 184 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 VIPR2P41587 438 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 FCHO2Q0JRZ9 810 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 GRIK3Q13003 919 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 SEMA3BQ13214 749 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 EMC2Q15006 297 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 PON2Q15165 354 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 PCBP1Q15365 356 aaKnown RBP eCLIP9.69□□□□□ -0.861e-7■■■■□ 23.7
TRAPPC1-202ENST00000540486 FOXD4L6Q3SYB3 417 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 CYP4A22Q5TCH4 519 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 KRT79Q5XKE5 535 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 HAUS3Q68CZ6 603 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 TENM4Q6N022 2769 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 TXNDC11Q6PKC3 985 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 FOXD4L3Q6VB84 417 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 PDZD4Q76G19 769 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 HACE1Q8IYU2 909 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 ASCC3Q8N3C0 2202 aaKnown RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 LINC00301Q8NCQ3 95 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 PRPF31Q8WWY3 499 aaKnown RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 SLC7A3Q8WY07 619 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 CCDC51Q96ER9 411 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 NLRP4Q96MN2 994 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 CLIC6Q96NY7 704 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 PLIN2Q99541 437 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 MTRQ99707 1265 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 RAB34Q9BZG1 259 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 CSRNP2Q9H175 543 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 POLD4Q9HCU8 107 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 DKK4Q9UBT3 224 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 EBF1Q9UH73 591 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 RAXQ9Y2V3 346 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 SRPRBQ9Y5M8 271 aaKnown RBP9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 HECTD1Q9ULT8 2610 aa9.69□□□□□ -0.86
TRAPPC1-202ENST00000540486 ZNF462Q96JM2 2506 aa9.68□□□□□ -0.86
TRAPPC1-202ENST00000540486 COL4A2P08572 1712 aa9.68□□□□□ -0.86
TRAPPC1-202ENST00000540486 ZMYM2Q9UBW7 1377 aa9.68□□□□□ -0.86
TRAPPC1-202ENST00000540486 ATXN7O15265 892 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC1-202ENST00000540486 ARHGAP6O43182 974 aa9.68□□□□□ -0.86
TRAPPC1-202ENST00000540486 CYP11B2P19099 503 aa9.68□□□□□ -0.86
TRAPPC1-202ENST00000540486 AXLP30530 894 aa9.68□□□□□ -0.86
TRAPPC1-202ENST00000540486 DDIT3P35638 169 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms