RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 CCDC142Q17RM4 750 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 SLC39A12Q504Y0 691 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 TMEM31Q5JXX7 168 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 RTL10Q7L3V2 364 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 GUF1Q8N442 669 aaKnown RBP16.21■□□□□ 0.19
UBE3B-212ENST00000540230 PARD3BQ8TEW8 1205 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 TMEM174Q8WUU8 243 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 RSAD2Q8WXG1 361 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 OXCT2Q9BYC2 517 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-212ENST00000540230 ZCWPW1Q9H0M4 648 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 GDAP2Q9NXN4 497 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 CEP72Q9P209 647 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 DSEQ9UL01 958 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 SLC27A5Q9Y2P5 690 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 PCDHA5Q9Y5H7 936 aa16.21■□□□□ 0.19
UBE3B-212ENST00000540230 RHOP08100 348 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 PABPC1LQ4VXU2 614 aaKnown RBP16.2■□□□□ 0.18
UBE3B-212ENST00000540230 ZCWPW2Q504Y3 356 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 CEP135Q66GS9 1140 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 CENPPQ6IPU0 288 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 METTL23Q86XA0 190 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 SPATA20Q8TB22 786 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 ING5Q8WYH8 240 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 HPDLQ96IR7 371 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 TIGD1Q96MW7 591 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 DNAJC25Q9H1X3 360 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 KCNK12Q9HB15 430 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 TMLHEQ9NVH6 421 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 EPS15L1Q9UBC2 864 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 SORCS3Q9UPU3 1222 aa16.2■□□□□ 0.18
UBE3B-212ENST00000540230 LAMP2P13473 410 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 ACAT1P24752 427 aaKnown RBP16.19■□□□□ 0.18
UBE3B-212ENST00000540230 CCR2P41597 374 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 SOWAHAQ2M3V2 549 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 HS6ST3Q8IZP7 471 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 FGF13Q92913 245 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 ELMO3Q96BJ8 720 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 TCEAL4Q96EI5 215 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 CCDC34Q96HJ3 373 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 CORO1BQ9BR76 489 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 RAPGEFL1Q9UHV5 662 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 CALUO43852 315 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-212ENST00000540230 HUS1O60921 280 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 PRPF40AO75400 957 aaKnown RBP16.19■□□□□ 0.18
UBE3B-212ENST00000540230 AKAP3O75969 853 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 NR2F2P24468 414 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 PRCPP42785 496 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 PRSS36Q5K4E3 855 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 C1orf220Q5T0J3 134 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 TDRD10Q5VZ19 366 aaKnown RBP16.19■□□□□ 0.18
UBE3B-212ENST00000540230 TRIM67Q6ZTA4 783 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 LIMS2Q7Z4I7 341 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 NPAS3Q8IXF0 933 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 ADGRF2Q8IZF7 708 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 THEM5Q8N1Q8 247 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 KBTBD7Q8WVZ9 684 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 ASIC4Q96FT7 647 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 EEF2KMTQ96G04 330 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 DDX43Q9NXZ2 648 aaKnown RBP16.19■□□□□ 0.18
UBE3B-212ENST00000540230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.19■□□□□ 0.18
UBE3B-212ENST00000540230 CDH7Q9ULB5 785 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 NME7Q9Y5B8 376 aa16.19■□□□□ 0.18
UBE3B-212ENST00000540230 WDFY4Q6ZS81 3184 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 GABRDO14764 452 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 NARSO43776 548 aaKnown RBP16.18■□□□□ 0.18
UBE3B-212ENST00000540230 KIF20AO95235 890 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 C4BPAP04003 597 aaKnown RBP16.18■□□□□ 0.18
UBE3B-212ENST00000540230 CEBPBP17676 345 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 PTPN2P17706 415 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 MYL6P60660 151 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 CLDN10P78369 228 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 MYO1EQ12965 1108 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 MTMR3Q13615 1198 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 NFIL3Q16649 462 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 ZNF658Q5TYW1 1059 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-212ENST00000540230 ISM2Q6H9L7 571 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 HFE2Q6ZVN8 426 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 TOP6BLQ8N6T0 577 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 SMARCE1Q969G3 411 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 GSDMAQ96QA5 445 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 RPP25Q9BUL9 199 aaKnown RBP16.18■□□□□ 0.18
UBE3B-212ENST00000540230 XYLT2Q9H1B5 865 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 MAFFQ9ULX9 164 aa16.18■□□□□ 0.18
UBE3B-212ENST00000540230 PRR33A8MZF0 331 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
UBE3B-212ENST00000540230 MOSPD3O75425 235 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 VNN1O95497 513 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 GJA1P17302 382 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 ATF6P18850 670 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 PMS1P54277 932 aaKnown RBP16.17■□□□□ 0.18
UBE3B-212ENST00000540230 SIGLEC14Q08ET2 396 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 TMEM86AQ8N2M4 240 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 FGF14Q92915 247 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 PKMYT1Q99640 499 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 LRRC3Q9BY71 257 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 RMND1Q9NWS8 449 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 ABI2Q9NYB9 513 aaPredicted RBP16.17■□□□□ 0.18
UBE3B-212ENST00000540230 MAN1B1Q9UKM7 699 aa16.17■□□□□ 0.18
UBE3B-212ENST00000540230 MRPS23Q9Y3D9 190 aaKnown RBP16.17■□□□□ 0.18
UBE3B-212ENST00000540230 R3HCC1Q9Y3T6 440 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms