RNA–Protein interactions for RNA: ENST00000540171.2

AL583722.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL583722.1, Length 1,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL583722.1-201ENST00000540171 NR2E1Q9Y466 385 aa17.11■□□□□ 0.33
AL583722.1-201ENST00000540171 C4BPAP04003 597 aaKnown RBP17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 POU2F2P09086 479 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 OR4Q2P0C623 313 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 EPB41P11171 864 aaKnown RBP17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 BMP6P22004 513 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 CCNE1P24864 410 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 ATICP31939 592 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 GPR17Q13304 367 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 TDRD10Q5VZ19 366 aaKnown RBP17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 KLHL10Q6JEL2 608 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 RNF19BQ6ZMZ0 732 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 DPH6Q7L8W6 267 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 TCEAL8Q8IYN2 117 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 OR10T2Q8NGX3 314 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 SYAP1Q96A49 352 aaPredicted RBP17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 CLSTN2Q9H4D0 955 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 WDR6Q9NNW5 1121 aaKnown RBP17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 L1RE1Q9UN81 338 aa17.1■□□□□ 0.33
AL583722.1-201ENST00000540171 LOC730098B7Z3J9 87 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 PPP1R3GB7ZBB8 358 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 CCL16O15467 120 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 STAU1O95793 577 aaKnown RBP17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 LRG1P02750 347 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 CD44P16070 742 aaKnown RBP17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 LHX1P48742 406 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 MYL7Q01449 175 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 NCOA4Q13772 614 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 SOWAHAQ2M3V2 549 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 ADGRF2Q8IZF7 708 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 PGLYRP2Q96PD5 576 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 MMS19Q96T76 1030 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 RTP3Q9BQQ7 232 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 ZCWPW1Q9H0M4 648 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 POLIQ9UNA4 740 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 USTQ9Y2C2 406 aa17.09■□□□□ 0.33
AL583722.1-201ENST00000540171 MTCL1Q9Y4B5 1905 aaKnown RBP17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 BICDL2A1A5D9 508 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 TRIM49BA6NDI0 452 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 SLC16A3O15427 465 aaKnown RBP17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 CLSTN1O94985 981 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 SEC24AO95486 1093 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 SP100P23497 879 aaPredicted RBP17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 MYL6P60660 151 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 TNNC1P63316 161 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 TSPY1Q01534 308 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 SMARCB1Q12824 385 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 ZACNQ401N2 412 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 C1orf220Q5T0J3 134 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 SV2AQ7L0J3 742 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 ZC3H3Q8IXZ2 948 aaKnown RBP17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 DCP1BQ8IZD4 617 aaKnown RBP17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 NELFBQ8WX92 580 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 TMEM209Q96SK2 561 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 NUP62CLQ9H1M0 184 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 DDX43Q9NXZ2 648 aaKnown RBP17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 INSL5Q9Y5Q6 135 aa17.08■□□□□ 0.32
AL583722.1-201ENST00000540171 CLUHO75153 1309 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 TRIM49P0CI25 452 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 TRIM49CP0CI26 452 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 PCSK1P29120 753 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 DUSP4Q13115 394 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 ZNF699Q32M78 642 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 SLC39A12Q504Y0 691 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 FOXR2Q6PJQ5 311 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 OTOP3Q7RTS5 596 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 LIMS2Q7Z4I7 341 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 GRASPQ7Z6J2 395 aaPredicted RBP17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 TDRD5Q8NAT2 981 aaKnown RBP17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 ATAD1Q8NBU5 361 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 ACSF2Q96CM8 615 aaPredicted RBP17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 ACBD6Q9BR61 282 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 XYLT2Q9H1B5 865 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 VRTNQ9H8Y1 702 aa17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
AL583722.1-201ENST00000540171 MTMR11A4FU01 709 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 GABRDO14764 452 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 STX10O60499 249 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 VNN1O95497 513 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 FAM163BP0C2L3 166 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 GTF2H1P32780 548 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 GCLMP48507 274 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 MCCD1P59942 119 aaPredicted RBP17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 PAK1Q13153 545 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 PLD1Q13393 1074 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 SGSM1Q2NKQ1 1148 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 TTI2Q6NXR4 508 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 OSTM1Q86WC4 334 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 ELMOD1Q8N336 334 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 C2orf15Q8WU43 125 aaKnown RBP17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 CEP63Q96MT8 703 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 EPHX3Q9H6B9 360 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 HSFX1Q9UBD0 423 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
AL583722.1-201ENST00000540171 C2CD4DB7Z1M9 353 aa17.05■□□□□ 0.32
AL583722.1-201ENST00000540171 TACC1O75410 805 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms