RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TDRD10Q5VZ19 366 aaKnown RBP4.54□□□□□ -1.68
C2CD3-214ENST00000540057 GIMAP6Q6P9H5 292 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 LRSAM1Q6UWE0 723 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 TSHZ1Q6ZSZ6 1077 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 TMC6Q7Z403 805 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 TMEM151BQ8IW70 566 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 THNSL1Q8IYQ7 743 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 C12orf76Q8N812 135 aaPredicted RBP4.54□□□□□ -1.68
C2CD3-214ENST00000540057 COLGALT1Q8NBJ5 622 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 TMEM87AQ8NBN3 555 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 RGS22Q8NE09 1264 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 NUP43Q8NFH3 380 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 MZB1Q8WU39 189 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 MRPS27Q92552 414 aaKnown RBP4.54□□□□□ -1.68
C2CD3-214ENST00000540057 ARHGAP45Q92619 1136 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 SECISBP2LQ93073 1101 aaKnown RBP4.54□□□□□ -1.68
C2CD3-214ENST00000540057 SPATA33Q96N06 139 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 STRBPQ96SI9 672 aaKnown RBP4.54□□□□□ -1.68
C2CD3-214ENST00000540057 IWS1Q96ST2 819 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 TCF25Q9BQ70 676 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 SRRTQ9BXP5 876 aaKnown RBP4.54□□□□□ -1.68
C2CD3-214ENST00000540057 XYLT2Q9H1B5 865 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 EPC1Q9H2F5 836 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 ZCCHC4Q9H5U6 513 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 AGO3Q9H9G7 860 aaKnown RBP4.54□□□□□ -1.68
C2CD3-214ENST00000540057 ZNF287Q9HBT7 754 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 PAG1Q9NWQ8 432 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 COL20A1Q9P218 1284 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 CA14Q9ULX7 337 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 SIT1Q9Y3P8 196 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 PCDHGB7Q9Y5F8 929 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 MRVI1Q9Y6F6 885 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.54□□□□□ -1.68
C2CD3-214ENST00000540057 MIA3Q5JRA6 1907 aa4.54□□□□□ -1.68
C2CD3-214ENST00000540057 FRMPD2Q68DX3 1309 aaPredicted RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 WDR19Q8NEZ3 1342 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 C2orf16Q68DN1 1984 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 NUDT19A8MXV4 375 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 ABLIM1O14639 778 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 NMT2O60551 498 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 CLASP2O75122 1294 aaKnown RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 EIF3JO75822 258 aaKnown RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 GGPS1O95749 300 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 LGALS2P05162 132 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 MPOP05164 745 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 STAG3L1P0CL83 205 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 GNAT1P11488 350 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 CD52P31358 61 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 ZNF76P36508 570 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 ZNF445P59923 1031 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 SP2Q02086 613 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 MVKQ03426 396 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 CCDC96Q2M329 555 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 PLEKHN1Q494U1 663 aaPredicted RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 XRRA1Q6P2D8 792 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 RPTNQ6XPR3 784 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 RUFY4Q6ZNE9 571 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 FAM129CQ86XR2 697 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 RBBP8NLQ8NC74 664 aaPredicted RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 ZBTB44Q8NCP5 570 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 PJA1Q8NG27 643 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 NSUN6Q8TEA1 469 aaKnown RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 DCAF4Q8WV16 495 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 LMBR1Q8WVP7 490 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 RSAD2Q8WXG1 361 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 BACH2Q9BYV9 841 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 BOLA2Q9H3K6 86 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 CWH43Q9H720 699 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 GP6Q9HCN6 339 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 IL1RAPL2Q9NP60 686 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 NGRNQ9NPE2 291 aaKnown RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 ENTPD7Q9NQZ7 604 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 IL17RBQ9NRM6 502 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 TYW1Q9NV66 732 aaKnown RBP4.53□□□□□ -1.68
C2CD3-214ENST00000540057 RTEL1Q9NZ71 1219 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 IGSF9Q9P2J2 1179 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 PNMA2Q9UL42 364 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 STX8Q9UNK0 236 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 LZTS1Q9Y250 596 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 EXOC6BQ9Y2D4 811 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 PCDHGA2Q9Y5H1 932 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 PCDHA5Q9Y5H7 936 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 CDY2AQ9Y6F7 541 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 ZZEF1O43149 2961 aa4.53□□□□□ -1.68
C2CD3-214ENST00000540057 DOCK5Q9H7D0 1870 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 RALGAPA1Q6GYQ0 2036 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 C2orf71A6NGG8 1288 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 TBKBP1A7MCY6 615 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 CYSRT1A8MQ03 144 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 FGF10O15520 208 aaPredicted RBP4.52□□□□□ -1.69
C2CD3-214ENST00000540057 CBFA2T2O43439 604 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 LAMTOR5O43504 91 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 TBC1D4O60343 1298 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 IMPDH2P12268 514 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 SCG2P13521 617 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 TRIM27P14373 513 aa4.52□□□□□ -1.69
C2CD3-214ENST00000540057 UBA1P22314 1058 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms