RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 WEE2P0C1S8 567 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 SRGAP2CP0DJJ0 459 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 BRD2P25440 801 aaKnown RBP13.63□□□□□ -0.23
MSH6-210ENST00000540021 GABPAQ06546 454 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 ORC1Q13415 861 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 RABGAP1LQ5R372 815 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 APOBEC3HQ6NTF7 200 aaKnown RBP13.63□□□□□ -0.23
MSH6-210ENST00000540021 RCOR2Q8IZ40 523 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 CCDC33Q8N5R6 958 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 MTBPQ96DY7 904 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 FAM163AQ96GL9 167 aaPredicted RBP13.63□□□□□ -0.23
MSH6-210ENST00000540021 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
MSH6-210ENST00000540021 PPP1R36Q96LQ0 422 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 PPP1R16BQ96T49 567 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 APOL6Q9BWW8 343 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 VCX3AQ9NNX9 186 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 NGRNQ9NPE2 291 aaKnown RBP13.63□□□□□ -0.23
MSH6-210ENST00000540021 SLC5A4Q9NY91 659 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 CORO1CQ9ULV4 474 aaPredicted RBP13.63□□□□□ -0.23
MSH6-210ENST00000540021 SLC4A7Q9Y6M7 1214 aa13.63□□□□□ -0.23
MSH6-210ENST00000540021 PFDN1O60925 122 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 PSMD10O75832 226 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 CETPP11597 493 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 GTF2H1P32780 548 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 EIF3EP60228 445 aaKnown RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 PRKG1Q13976 671 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 MAP7Q14244 749 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 NXNQ6DKJ4 435 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 RIBC1Q8N443 379 aaPredicted RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 ABTB1Q969K4 478 aaPredicted RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 P2RX7Q99572 595 aaKnown RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 POLR3FQ9H1D9 316 aaPredicted RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 KCND2Q9NZV8 630 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 SEPT10Q9P0V9 454 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 WRAP73Q9P2S5 460 aaPredicted RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 MYH1P12882 1939 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 MYH4Q9Y623 1939 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 DCCP43146 1447 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 SYNJ2BP-COX16A0A087WUM0 186 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 ECE2O60344 883 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 CHRNB2P17787 502 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 PSMC1P62191 440 aaKnown RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 AP2B1P63010 937 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 PRPF39Q86UA1 669 aaKnown RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 ST13P4Q8IZP2 240 aaPredicted RBP13.62□□□□□ -0.23
MSH6-210ENST00000540021 PCMTD2Q9NV79 361 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 COX16Q9P0S2 106 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 GAKO14976 1311 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 SPDYE5A6NIY4 337 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 NFIBO00712 420 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 PYGBP11216 843 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 BLMHQ13867 455 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 RFWD3Q6PCD5 774 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 IZUMO2Q6UXV1 221 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 EEPD1Q7L9B9 569 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 TRABD2AQ86V40 505 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 FAXDC2Q96IV6 333 aa13.62□□□□□ -0.23
MSH6-210ENST00000540021 F8VP50 259 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 DNALI1O14645 258 aaPredicted RBP13.61□□□□□ -0.23
MSH6-210ENST00000540021 CYP1A2P05177 515 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 APRTP07741 180 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 MTMR2Q13614 643 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 LARGE2Q8N3Y3 721 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 TTC16Q8NEE8 873 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 RFWD2Q8NHY2 731 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 ACTL9Q8TC94 416 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 SEC14L1Q92503 715 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 RAB6BQ9NRW1 208 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 STARD13Q9Y3M8 1113 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 TIAM2Q8IVF5 1701 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 KAT6AQ92794 2004 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 TRIM49D1C9J1S8 452 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 RBP3P10745 1247 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 RPL7AP62424 266 aaKnown RBP13.61□□□□□ -0.23
MSH6-210ENST00000540021 OTUD4Q01804 1114 aaKnown RBP13.61□□□□□ -0.23
MSH6-210ENST00000540021 BMPR2Q13873 1038 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 KHDC1Q4VXA5 237 aaKnown RBP13.61□□□□□ -0.23
MSH6-210ENST00000540021 ATG16L1Q676U5 607 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 HHIPL2Q6UWX4 724 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 LRRC74BQ6ZQY2 392 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 SP8Q8IXZ3 490 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 SHC3Q92529 594 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 ATP2A3Q93084 1043 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 LENG9Q96B70 501 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 ATXN7L3BQ96GX2 97 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 TAF1P21675 1872 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 H0YIN7 160 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 KIF3CO14782 793 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 GRAP2O75791 330 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 ZBED1O96006 694 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 RASA2Q15283 850 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 RC3H1Q5TC82 1133 aaKnown RBP13.61□□□□□ -0.23
MSH6-210ENST00000540021 MROH9Q5TGP6 573 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 EMC1Q8N766 993 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 CENPKQ9BS16 269 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 NMRK1Q9NWW6 199 aa13.61□□□□□ -0.23
MSH6-210ENST00000540021 SLC17A7Q9P2U7 560 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms