RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 CCT2P78371 535 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 AMPD2Q01433 879 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ROR1Q01973 937 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CYP4A11Q02928 519 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 FCHO2Q0JRZ9 810 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 PRPF4BQ13523 1007 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 MAPK6Q16659 721 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 DCAF4L1Q3SXM0 396 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ARHGAP29Q52LW3 1261 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CD300LGQ6UXG3 332 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 RUFY3Q7L099 469 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CREBRFQ8IUR6 639 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 MCPH1Q8NEM0 835 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 APPL2Q8NEU8 664 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ZSCAN18Q8TBC5 510 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 HAS1Q92839 578 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 EXOC4Q96A65 974 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ZSWIM3Q96MP5 696 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 EIF2AK1Q9BQI3 630 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ZSCAN16Q9H4T2 348 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 ASAH2Q9NR71 780 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 THG1LQ9NWX6 298 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 OBP2AQ9NY56 170 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 OGFRQ9NZT2 677 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CEP72Q9P209 647 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CGNQ9P2M7 1197 aaKnown RBP6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CACNG4Q9UBN1 327 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 PRDM4Q9UKN5 801 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 CFAP45Q9UL16 551 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 SLC8A2Q9UPR5 921 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 INSL5Q9Y5Q6 135 aa6.51□□□□□ -1.37
CPSF7-219ENST00000539952 PATJQ8NI35 1801 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 NID2Q14112 1375 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 SMIM28A0A1B0GU29 152 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 C4orf47A7E2U8 309 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 SLC37A4O43826 429 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 NRDCO43847 1150 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 MOSPD3O75425 235 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 SEC24AO95486 1093 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 FGF19O95750 216 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 CSRP1P21291 193 aaKnown RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 GJB2P29033 226 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 RDXP35241 583 aaKnown RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 MPLP40238 635 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 CCR2P41597 374 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 BRCC3P46736 316 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 RARRES1P49788 294 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 NOVA1P51513 510 aaKnown RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 EFNA5P52803 228 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 YARSP54577 528 aaKnown RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 EPHB3P54753 998 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 TWF1Q12792 350 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 PLD1Q13393 1074 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 CCINQ13939 588 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 PPP2R5AQ15172 486 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 TEAD2Q15562 447 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 QPCTQ16769 361 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 CTXN3Q4LDR2 81 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 FOXD4L5Q5VV16 416 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 LARP1BQ659C4 914 aaKnown RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 CDCA2Q69YH5 1023 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 PSAPL1Q6NUJ1 521 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 ALKAL1Q6UXT8 129 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 KBTBD6Q86V97 674 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 LAPTM4BQ86VI4 370 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 NOSTRINQ8IVI9 506 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 ARID3BQ8IVW6 561 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 FOXD4L4Q8WXT5 416 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 ZNF274Q96GC6 653 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 PPP1R10Q96QC0 940 aaKnown RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 TMEM209Q96SK2 561 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 POLR3FQ9H1D9 316 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 NUP62CLQ9H1M0 184 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 PDZD7Q9H5P4 517 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 SLITRK6Q9H5Y7 841 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 TOPORSQ9NS56 1045 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 RBM12Q9NTZ6 932 aaKnown RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 FBXL5Q9UKA1 691 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 GDAQ9Y2T3 454 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 ASB3Q9Y575 518 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 NUB1Q9Y5A7 615 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 NOTCH4Q99466 2003 aa6.5□□□□□ -1.37
CPSF7-219ENST00000539952 TDRD15B5MCY1 1934 aaKnown RBP6.5□□□□□ -1.37
CPSF7-219ENST00000539952 USP24Q9UPU5 2620 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 SRRM3A6NNA2 597 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-219ENST00000539952 SLC38A8A6NNN8 435 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 NRG2O14511 850 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-219ENST00000539952 PRKCBP05771 671 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 RPS6KB1P23443 525 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 CTHP32929 405 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 GABPB1Q06547 395 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-219ENST00000539952 GRSF1Q12849 480 aaKnown RBP eCLIP6.49□□□□□ -1.37
CPSF7-219ENST00000539952 FOXC1Q12948 553 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 KARSQ15046 597 aaKnown RBP6.49□□□□□ -1.37
CPSF7-219ENST00000539952 PON2Q15165 354 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 ELF2Q15723 593 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 NPY5RQ15761 445 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 CCDC6Q16204 474 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 ITPRIPL2Q3MIP1 535 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms