RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 EPB41L4BQ9H329 900 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 RIOX1Q9H6W3 641 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 CCSER2Q9H7U1 834 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 NLRC4Q9NPP4 1024 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 SPATS2LQ9NUQ6 558 aaKnown RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 PANK4Q9NVE7 773 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 ZNFX1Q9P2E3 1918 aaKnown RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 BAIAP2L1Q9UHR4 511 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 FEM1BQ9UK73 627 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 ARL2BPQ9Y2Y0 163 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 ACTL7BQ9Y614 415 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 CYP2D7A0A087X1C5 515 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ASB14A6NK59 587 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 F5H6K3 240 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 TNFRSF10BO14763 440 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 KIAA0391O15091 583 aaKnown RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 GPR182O15218 404 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 CALUO43852 315 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 AHCYL1O43865 530 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 PLA2G6O60733 806 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 CAND2O75155 1236 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SMNDC1O75940 238 aaKnown RBP eCLIP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 EYA4O95677 639 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 NDUFB10O96000 172 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 FGBP02675 491 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 FESP07332 822 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 RARAP10276 462 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 CCNB1P14635 433 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 UCHL3P15374 230 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 CSF2RAP15509 400 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 PLA2G5P39877 138 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 STAT1P42224 750 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SLC18A1P54219 525 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 RWDD2BP57060 319 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 NCALDP61601 193 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 FOXK2Q01167 660 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 DR1Q01658 176 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ADAM9Q13443 819 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 CNGA2Q16280 664 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 CYP1B1Q16678 543 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 EXOC3L4Q17RC7 722 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 BMT2Q1RMZ1 405 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SLC35G1Q2M3R5 365 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SPRED3Q2MJR0 410 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 TKFCQ3LXA3 575 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ZNF568Q3ZCX4 644 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 CAPRIN2Q6IMN6 1127 aaKnown RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 MOXD1Q6UVY6 613 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SYDE1Q6ZW31 735 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ZNF365Q70YC5 407 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ASRGL1Q7L266 308 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ARMCX2Q7L311 632 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 APBB1IPQ7Z5R6 666 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 LRRC34Q8IZ02 419 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 RPUSD2Q8IZ73 545 aaKnown RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ANKRD35Q8N283 1001 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 OR2W6PQ8NHA6 318 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 NEDD1Q8NHV4 660 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 RASGRP4Q8TDF6 673 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 TBCKQ8TEA7 893 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ZFAND2BQ8WV99 257 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 RFFLQ8WZ73 363 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SLCO2A1Q92959 643 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 UHRF1Q96T88 793 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 PLIN2Q99541 437 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 KATNBL1Q9H079 304 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 DDX47Q9H0S4 455 aaKnown RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SLC28A3Q9HAS3 691 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 RXFP1Q9HBX9 757 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 RNF19AQ9NV58 838 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SCHIP1Q9P0W5 487 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 PRKAG3Q9UGI9 489 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 SEC63Q9UGP8 760 aaKnown RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 ARMCX3Q9UH62 379 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-204ENST00000539847 AMACRQ9UHK6 382 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 USP3Q9Y6I4 520 aa8.15□□□□□ -1.1
CCDC60-204ENST00000539847 CHD7Q9P2D1 2997 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PLIN4Q96Q06 1357 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 IGKV6D-41A0A0C4DH26 115 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 MYADML2A6NDP7 307 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 A6NJY4 79 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 NKRFO15226 690 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 MAGEB2O15479 319 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 DDX3YO15523 660 aaKnown RBP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 TTI1O43156 1089 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 NMT2O60551 498 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 HNRNPCL1O60812 293 aaKnown RBP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PHF2O75151 1096 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 IL2RAP01589 272 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 LMNAP02545 664 aaKnown RBP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 VIMP08670 466 aaKnown RBP8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PAX7P23759 505 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 CTNNA2P26232 953 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PON1P27169 355 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 ZNF76P36508 570 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 FLT3P36888 993 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 TXKP42681 527 aa8.14□□□□□ -1.11
CCDC60-204ENST00000539847 PTGIRP43119 386 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms