RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SOWAHAQ2M3V2 549 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 ZNF571Q7Z3V5 609 aaPredicted RBP11.37□□□□□ -0.59
LEMD3-202ENST00000539442 UNC93AQ86WB7 457 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 ZNF280BQ86YH2 543 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 TMEM86AQ8N2M4 240 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 APPL2Q8NEU8 664 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 KIAA1524Q8TCG1 905 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 SDCBP2Q9H190 292 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 KCND1Q9NSA2 647 aa11.37□□□□□ -0.59
LEMD3-202ENST00000539442 NOCTQ9UK39 431 aaKnown RBP11.37□□□□□ -0.59
LEMD3-202ENST00000539442 CYB561D2O14569 222 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 KIF4AO95239 1232 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 CCDC175P0C221 793 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 ODC1P11926 461 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 WARSP23381 471 aaKnown RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 MSNP26038 577 aaKnown RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 GNA15P30679 374 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 RAP1GAPP47736 663 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 OR1G1P47890 313 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 CDH8P55286 799 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 DEFB103AP81534 67 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 CDR2Q01850 454 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 MTF1Q14872 753 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 SPA17Q15506 151 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 TMEM240Q5SV17 173 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 DSTYKQ6XUX3 929 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 ZNF365Q70YC5 407 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 C16orf59Q7L2K0 433 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 NOP9Q86U38 636 aaKnown RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 GPIHBP1Q8IV16 184 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 CMTR2Q8IYT2 770 aaKnown RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 ADGRF2Q8IZF7 708 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 TXLNBQ8N3L3 684 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 C3orf58Q8NDZ4 430 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 WHAMMQ8TF30 809 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 ZNF689Q96CS4 500 aaPredicted RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 TMEM176AQ96HP8 235 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 SENP8Q96LD8 212 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 AGPAT1Q99943 283 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 LBHD1Q9BQE6 289 aaPredicted RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 PAAF1Q9BRP4 392 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 NT5C1AQ9BXI3 368 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 MTIF3Q9H2K0 278 aaKnown RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 NRDE2Q9H7Z3 1164 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 RC3H2Q9HBD1 1191 aaKnown RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 LUC7LQ9NQ29 371 aaKnown RBP11.36□□□□□ -0.59
LEMD3-202ENST00000539442 DSEQ9UL01 958 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 L1RE1Q9UN81 338 aa11.36□□□□□ -0.59
LEMD3-202ENST00000539442 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 TDRD15B5MCY1 1934 aaKnown RBP11.35□□□□□ -0.59
LEMD3-202ENST00000539442 CCDC85CA6NKD9 419 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 M0QZQ0 153 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 DDX3XO00571 662 aaKnown RBP eCLIP11.35□□□□□ -0.59
LEMD3-202ENST00000539442 ZSCAN12O43309 604 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 TRAPPC3O43617 180 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 B4GALT3O60512 393 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 UPP2O95045 317 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 CYP11A1P05108 521 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 TYMPP19971 482 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 TNFAIP3P21580 790 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 GATMP50440 423 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 NDST1P52848 882 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 RAD23BP54727 409 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 C10orf76Q5T2E6 689 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 CD300LGQ6UXG3 332 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 TRIM72Q6ZMU5 477 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 TOGARAM2Q6ZUX3 1019 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 OTOP2Q7RTS6 562 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 PDCL2Q8N4E4 241 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 OR6B3Q8NGW1 331 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 SLC30A5Q8TAD4 765 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 OLIG1Q8TAK6 271 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 KBTBD7Q8WVZ9 684 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 HERVK_113Q902F9 699 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 DDX1Q92499 740 aaKnown RBP11.35□□□□□ -0.59
LEMD3-202ENST00000539442 DPF3Q92784 378 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 SUSD3Q96L08 255 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 MRPL45Q9BRJ2 306 aaKnown RBP11.35□□□□□ -0.59
LEMD3-202ENST00000539442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.35□□□□□ -0.59
LEMD3-202ENST00000539442 COLEC11Q9BWP8 271 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 SNX25Q9H3E2 840 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 SPTLC3Q9NUV7 552 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 CACNG4Q9UBN1 327 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 ADAMTS1Q9UHI8 967 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 KIAA1257Q9ULG3 409 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 NR2E3Q9Y5X4 410 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 ADGRG1Q9Y653 693 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 SCN1AP35498 2009 aa11.35□□□□□ -0.59
LEMD3-202ENST00000539442 A0A087X0T9 212 aa11.34□□□□□ -0.59
LEMD3-202ENST00000539442 GOLGA6L9A6NEM1 432 aa11.34□□□□□ -0.59
LEMD3-202ENST00000539442 A8MXQ7 604 aa11.34□□□□□ -0.59
LEMD3-202ENST00000539442 GABRDO14764 452 aa11.34□□□□□ -0.59
LEMD3-202ENST00000539442 NRP1O14786 923 aa11.34□□□□□ -0.59
LEMD3-202ENST00000539442 THAP12O43422 761 aa11.34□□□□□ -0.59
LEMD3-202ENST00000539442 MED7O43513 233 aa11.34□□□□□ -0.59
LEMD3-202ENST00000539442 ALDH2P05091 517 aa11.34□□□□□ -0.59
LEMD3-202ENST00000539442 GALTP07902 379 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms