RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 KCNE1P15382 129 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 ENGP17813 658 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 GRM5P41594 1212 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 EFNA5P52803 228 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 ATXN3P54252 364 aaPredicted RBP13.15□□□□□ -0.3
YBX3-207ENST00000539204 YWHAHQ04917 246 aaPredicted RBP13.15□□□□□ -0.3
YBX3-207ENST00000539204 C19orf57Q0VDD7 668 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 HNRNPDQ14103 355 aaKnown RBP13.15□□□□□ -0.3
YBX3-207ENST00000539204 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 TRIM68Q6AZZ1 485 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 CENPPQ6IPU0 288 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 PIK3AP1Q6ZUJ8 805 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 RAB44Q7Z6P3 723 aaPredicted RBP13.15□□□□□ -0.3
YBX3-207ENST00000539204 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 LRIG1Q96JA1 1093 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 SLC46A2Q9BY10 475 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 TPSD1Q9BZJ3 242 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 CRISPLD1Q9H336 500 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 ZMYM5Q9UJ78 669 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 TNFSF13BQ9Y275 285 aa13.15□□□□□ -0.3
YBX3-207ENST00000539204 MAST4O15021 2626 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 ARID2Q68CP9 1835 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 K7ERI5 159 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 MAP3K13O43283 966 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 BCKDHBP21953 392 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 CDC25CP30307 473 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 CYP4F8P98187 520 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 CC2D1AQ6P1N0 951 aaPredicted RBP13.14□□□□□ -0.31
YBX3-207ENST00000539204 SLC23A3Q6PIS1 610 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 LPCAT2Q7L5N7 544 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 USP37Q86T82 979 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 SYT12Q8IV01 421 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 CMTM8Q8IZV2 173 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 CEP120Q8N960 986 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 ADAM32Q8TC27 787 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 C18orf25Q96B23 403 aaPredicted RBP13.14□□□□□ -0.31
YBX3-207ENST00000539204 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
YBX3-207ENST00000539204 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 ACAP3Q96P50 834 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 GCNAQ96QF7 691 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 AGXT2Q9BYV1 514 aa13.14□□□□□ -0.31
YBX3-207ENST00000539204 TTC12Q9H892 705 aaPredicted RBP13.14□□□□□ -0.31
YBX3-207ENST00000539204 TIMM13Q9Y5L4 95 aaPredicted RBP13.14□□□□□ -0.31
YBX3-207ENST00000539204 BPTFQ12830 3046 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 TRIP11Q15643 1979 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 THADAQ6YHU6 1953 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 OR6C75A6NL08 312 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 TNFRSF10BO14763 440 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.312e-8■■■□□ 15.1
YBX3-207ENST00000539204 GJA4P35212 333 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 AVPR1AP37288 418 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 DPP6P42658 865 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 EVCP57679 992 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 FAM193AP78312 1265 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 BFSP1Q12934 665 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 TAF12Q16514 161 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 ANO7Q6IWH7 933 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 ARMCX5Q6P1M9 558 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 ATAD1Q8NBU5 361 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 CD101Q93033 1021 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 IFT74Q96LB3 600 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
YBX3-207ENST00000539204 TMEM74BQ9NUR3 256 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
YBX3-207ENST00000539204 TBX20Q9UMR3 447 aa13.13□□□□□ -0.31
YBX3-207ENST00000539204 KIF26AQ9ULI4 1882 aaPredicted RBP13.12□□□□□ -0.31
YBX3-207ENST00000539204 M0QZQ0 153 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 OPHN1O60890 802 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 SOAT2O75908 522 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 ARSAP15289 507 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 CYP11B2P19099 503 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 TXKP42681 527 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 TUFMP49411 452 aaKnown RBP13.12□□□□□ -0.31
YBX3-207ENST00000539204 PDGFRLQ15198 375 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 CALCRLQ16602 461 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 ZNF568Q3ZCX4 644 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
YBX3-207ENST00000539204 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 CCNI2Q6ZMN8 369 aaPredicted RBP13.12□□□□□ -0.31
YBX3-207ENST00000539204 RASSF3Q86WH2 238 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
YBX3-207ENST00000539204 ACO2Q99798 780 aaKnown RBP13.12□□□□□ -0.31
YBX3-207ENST00000539204 TCHPQ9BT92 498 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
YBX3-207ENST00000539204 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 CACNA2D2Q9NY47 1150 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 CNTN3Q9P232 1028 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 HSFX1Q9UBD0 423 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
YBX3-207ENST00000539204 CCL26Q9Y258 94 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 GON4LQ3T8J9 2241 aa13.12□□□□□ -0.31
YBX3-207ENST00000539204 ACACAQ13085 2346 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 MTMR11A4FU01 709 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 ALDH1A2O94788 518 aa13.11□□□□□ -0.31
YBX3-207ENST00000539204 SPATA31C1P0DKV0 1188 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms