RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FECHP22830 423 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 IGFBP6P24592 240 aaPredicted RBP15.1■□□□□ 0.01
CD4-208ENST00000538827 DNAJB2P25686 324 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 HNRNPH3P31942 346 aaKnown RBP15.1■□□□□ 0.01
CD4-208ENST00000538827 CYLC1P35663 651 aaPredicted RBP15.1■□□□□ 0.01
CD4-208ENST00000538827 BRCC3P46736 316 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 BCAR1P56945 870 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 LILRA4P59901 499 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 DSC1Q08554 894 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 HS1BP3Q53T59 392 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 TMEM240Q5SV17 173 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 TAF3Q5VWG9 929 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 RAD9BQ6WBX8 426 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 C16orf59Q7L2K0 433 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 ADGRF2Q8IZF7 708 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 APPL2Q8NEU8 664 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 RSPH1Q8WYR4 309 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 JAKMIP2Q96AA8 810 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 FAXDC2Q96IV6 333 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 YME1L1Q96TA2 773 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 MRPL45Q9BRJ2 306 aaKnown RBP15.1■□□□□ 0.01
CD4-208ENST00000538827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.1■□□□□ 0.01
CD4-208ENST00000538827 MTIF3Q9H2K0 278 aaKnown RBP15.1■□□□□ 0.01
CD4-208ENST00000538827 SNX25Q9H3E2 840 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 NHEJ1Q9H9Q4 299 aaPredicted RBP15.1■□□□□ 0.01
CD4-208ENST00000538827 ARHGAP20Q9P2F6 1191 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 HMGXB4Q9UGU5 601 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 PYCARDQ9ULZ3 195 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 L1RE1Q9UN81 338 aa15.1■□□□□ 0.01
CD4-208ENST00000538827 CYB561D2O14569 222 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 THAP12O43422 761 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 AKR1B10O60218 316 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 DGKIO75912 1065 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 ODC1P11926 461 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 CD19P15391 556 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 GNA15P30679 374 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 PRKCIP41743 596 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 SLC11A1P49279 550 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 KIF11P52732 1056 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 BTG3Q14201 252 aaPredicted RBP15.09■□□□□ 0.01
CD4-208ENST00000538827 HGSNATQ68CP4 663 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 SLC47A2Q86VL8 602 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 VPS36Q86VN1 386 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 CRIPAKQ8N1N5 446 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 OR6B3Q8NGW1 331 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 SLC20A1Q8WUM9 679 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 TOP1MTQ969P6 601 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 SENP8Q96LD8 212 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 CCDC42Q96M95 316 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 DESI2Q9BSY9 194 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 ACP6Q9NPH0 428 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 SPTLC3Q9NUV7 552 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 GDAP2Q9NXN4 497 aa15.09■□□□□ 0.01
CD4-208ENST00000538827 FAM170AA1A519 330 aa15.08■□□□□ 0
CD4-208ENST00000538827 CILPO75339 1184 aa15.08■□□□□ 0
CD4-208ENST00000538827 IPO7O95373 1038 aaKnown RBP15.08■□□□□ 0
CD4-208ENST00000538827 ITGB1P05556 798 aa15.08■□□□□ 0
CD4-208ENST00000538827 BRD2P25440 801 aaKnown RBP15.08■□□□□ 0
CD4-208ENST00000538827 CLCN1P35523 988 aa15.08■□□□□ 0
CD4-208ENST00000538827 PBX3P40426 434 aa15.08■□□□□ 0
CD4-208ENST00000538827 NDST1P52848 882 aa15.08■□□□□ 0
CD4-208ENST00000538827 BPIFB4P59827 614 aa15.08■□□□□ 0
CD4-208ENST00000538827 CDK17Q00537 523 aa15.08■□□□□ 0
CD4-208ENST00000538827 PTK2Q05397 1052 aa15.08■□□□□ 0
CD4-208ENST00000538827 SOWAHAQ2M3V2 549 aa15.08■□□□□ 0
CD4-208ENST00000538827 TIGD5Q53EQ6 642 aa15.08■□□□□ 0
CD4-208ENST00000538827 DCLRE1AQ6PJP8 1040 aa15.08■□□□□ 0
CD4-208ENST00000538827 TOGARAM2Q6ZUX3 1019 aa15.08■□□□□ 0
CD4-208ENST00000538827 ZNF571Q7Z3V5 609 aaPredicted RBP15.08■□□□□ 0
CD4-208ENST00000538827 IRF2BP2Q7Z5L9 587 aa15.08■□□□□ 0
CD4-208ENST00000538827 NOP9Q86U38 636 aaKnown RBP15.08■□□□□ 0
CD4-208ENST00000538827 CMTR2Q8IYT2 770 aaKnown RBP15.08■□□□□ 0
CD4-208ENST00000538827 PDCL2Q8N4E4 241 aa15.08■□□□□ 0
CD4-208ENST00000538827 TTC39CQ8N584 583 aa15.08■□□□□ 0
CD4-208ENST00000538827 TOP6BLQ8N6T0 577 aa15.08■□□□□ 0
CD4-208ENST00000538827 EPS8L1Q8TE68 723 aa15.08■□□□□ 0
CD4-208ENST00000538827 PPM1EQ8WY54 764 aa15.08■□□□□ 0
CD4-208ENST00000538827 TMEM175Q9BSA9 504 aa15.08■□□□□ 0
CD4-208ENST00000538827 ZBED2Q9BTP6 218 aa15.08■□□□□ 0
CD4-208ENST00000538827 ELOVL4Q9GZR5 314 aa15.08■□□□□ 0
CD4-208ENST00000538827 PDCL3Q9H2J4 239 aa15.08■□□□□ 0
CD4-208ENST00000538827 CXXC1Q9P0U4 656 aaPredicted RBP15.08■□□□□ 0
CD4-208ENST00000538827 ZKSCAN5Q9Y2L8 839 aa15.08■□□□□ 0
CD4-208ENST00000538827 FAN1Q9Y2M0 1017 aa15.08■□□□□ 0
CD4-208ENST00000538827 BZW2Q9Y6E2 419 aaKnown RBP15.08■□□□□ 0
CD4-208ENST00000538827 SSU72P8A0A1W2PR75 194 aa15.07■□□□□ 0
CD4-208ENST00000538827 ARHGEF37A1IGU5 675 aa15.07■□□□□ 0
CD4-208ENST00000538827 NT5C1B-RDH14C9J2C7 533 aa15.07■□□□□ 0
CD4-208ENST00000538827 NRP1O14786 923 aa15.07■□□□□ 0
CD4-208ENST00000538827 TADA2AO75478 443 aa15.07■□□□□ 0
CD4-208ENST00000538827 CYP11B1P15538 503 aa15.07■□□□□ 0
CD4-208ENST00000538827 TNFAIP3P21580 790 aa15.07■□□□□ 0
CD4-208ENST00000538827 SSTR3P32745 418 aaPredicted RBP15.07■□□□□ 0
CD4-208ENST00000538827 ZNF132P52740 706 aa15.07■□□□□ 0
CD4-208ENST00000538827 INCA1Q0VD86 236 aa15.07■□□□□ 0
CD4-208ENST00000538827 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
CD4-208ENST00000538827 WSCD1Q658N2 575 aa15.07■□□□□ 0
CD4-208ENST00000538827 DPH6Q7L8W6 267 aa15.07■□□□□ 0
CD4-208ENST00000538827 OSTM1Q86WC4 334 aa15.07■□□□□ 0
CD4-208ENST00000538827 METTL23Q86XA0 190 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms