RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SENP8Q96LD8 212 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 HERC2P3Q9BVR0 1158 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 IMPG2Q9BZV3 1241 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 CERS4Q9HA82 394 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 KCND1Q9NSA2 647 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 APEX2Q9UBZ4 518 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 DNAJC12Q9UKB3 198 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 SNX9Q9Y5X1 595 aa18.44■□□□□ 0.54
CLN6-202ENST00000538696 RB1P06400 928 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 PLEKP08567 350 aaPredicted RBP18.43■□□□□ 0.54
CLN6-202ENST00000538696 ASPAP45381 313 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 TNNC1P63316 161 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 ASIC2Q16515 512 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 WDR72Q3MJ13 1102 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 WDR44Q5JSH3 913 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 PHLDB3Q6NSJ2 640 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 SCARA5Q6ZMJ2 495 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 TAS1R1Q7RTX1 841 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 DDX53Q86TM3 631 aaKnown RBP18.43■□□□□ 0.54
CLN6-202ENST00000538696 FBXO22Q8NEZ5 403 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 SYN2Q92777 582 aaPredicted RBP18.43■□□□□ 0.54
CLN6-202ENST00000538696 TATDN2Q93075 761 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 NT5C1BQ96P26 610 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 NIF3L1Q9GZT8 377 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 NUCKS1Q9H1E3 243 aaKnown RBP18.43■□□□□ 0.54
CLN6-202ENST00000538696 SMYD3Q9H7B4 428 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 ARHGAP20Q9P2F6 1191 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 NXF1Q9UBU9 619 aaKnown RBP18.43■□□□□ 0.54
CLN6-202ENST00000538696 PCDHB8Q9UN66 801 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 L1RE1Q9UN81 338 aa18.43■□□□□ 0.54
CLN6-202ENST00000538696 EPOPA6NHQ4 379 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 CYB561D2O14569 222 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 FGFR3P22607 806 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 TKTP29401 623 aaKnown RBP18.42■□□□□ 0.54
CLN6-202ENST00000538696 ELAVL2Q12926 359 aaKnown RBP18.42■□□□□ 0.54
CLN6-202ENST00000538696 FAM171A1Q5VUB5 890 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.42■□□□□ 0.54
CLN6-202ENST00000538696 LIMS2Q7Z4I7 341 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 TOP6BLQ8N6T0 577 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 ACRBPQ8NEB7 543 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 ARNTL2Q8WYA1 636 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 PPP1R13BQ96KQ4 1090 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 B3GALT6Q96L58 329 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 SPAG5Q96R06 1193 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 C11orf84Q9BUA3 381 aaPredicted RBP18.42■□□□□ 0.54
CLN6-202ENST00000538696 SDCBP2Q9H190 292 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 MYO6Q9UM54 1294 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 PPP2R2CQ9Y2T4 447 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 DAAM1Q9Y4D1 1078 aa18.42■□□□□ 0.54
CLN6-202ENST00000538696 TRAPPC3O43617 180 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 SOD2P04179 222 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 PNMA6AP0CW24 399 aaPredicted RBP18.41■□□□□ 0.54
CLN6-202ENST00000538696 ODC1P11926 461 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 DNAJB1P25685 340 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 EIF4A3P38919 411 aaKnown RBP18.41■□□□□ 0.54
CLN6-202ENST00000538696 RAP1GAPP47736 663 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 SOWAHAQ2M3V2 549 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 HGSNATQ68CP4 663 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 PDCL2Q8N4E4 241 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 SPPL3Q8TCT6 385 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 KAT5Q92993 513 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 ARID3AQ99856 593 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 STK33Q9BYT3 514 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 BCO2Q9BYV7 579 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 GPR88Q9GZN0 384 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 ZBP1Q9H171 429 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 NHEJ1Q9H9Q4 299 aaPredicted RBP18.41■□□□□ 0.54
CLN6-202ENST00000538696 ALG13Q9NP73 1137 aaKnown RBP18.41■□□□□ 0.54
CLN6-202ENST00000538696 AIPL1Q9NZN9 384 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 LZTS1Q9Y250 596 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 TIMM13Q9Y5L4 95 aaPredicted RBP18.41■□□□□ 0.54
CLN6-202ENST00000538696 ADGRG1Q9Y653 693 aa18.41■□□□□ 0.54
CLN6-202ENST00000538696 F8VZ95 297 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 H3BNC9 293 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 SYN3O14994 580 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 GRM6O15303 877 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 HUS1O60921 280 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 CYP11A1P05108 521 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 TYMPP19971 482 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 RFX1P22670 979 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 KRT17Q04695 432 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 GPM6BQ13491 265 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 DRAP1Q14919 205 aaPredicted RBP18.4■□□□□ 0.54
CLN6-202ENST00000538696 ARHGAP44Q17R89 818 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 RTP2Q5QGT7 225 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 WSCD1Q658N2 575 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 OSTM1Q86WC4 334 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 REXO1L1PQ8IX06 675 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 GDPD5Q8WTR4 605 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 POF1BQ8WVV4 589 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 KBTBD7Q8WVZ9 684 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 MMS19Q96T76 1030 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 MRPL45Q9BRJ2 306 aaKnown RBP18.4■□□□□ 0.54
CLN6-202ENST00000538696 UBE2TQ9NPD8 197 aaPredicted RBP18.4■□□□□ 0.54
CLN6-202ENST00000538696 EPN1Q9Y6I3 576 aaPredicted RBP18.4■□□□□ 0.54
CLN6-202ENST00000538696 LAMA3Q16787 3333 aa18.4■□□□□ 0.54
CLN6-202ENST00000538696 MYO9BQ13459 2157 aa18.39■□□□□ 0.54
CLN6-202ENST00000538696 LAMA2P24043 3122 aaKnown RBP18.39■□□□□ 0.53
CLN6-202ENST00000538696 TMEM265A0A087WTH1 108 aa18.39■□□□□ 0.53
CLN6-202ENST00000538696 NDUFA10O95299 355 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms