RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SGSM1Q2NKQ1 1148 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 VPS37AQ8NEZ2 397 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 FLCNQ8NFG4 579 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 STK32AQ8WU08 396 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 ZNF560Q96MR9 790 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 KLHL3Q9UH77 587 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 AP3M1Q9Y2T2 418 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 MAP3K4Q9Y6R4 1608 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 IQGAP3Q86VI3 1631 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 DENND3A2RUS2 1198 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 RNF103O00237 685 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 DNALI1O14645 258 aaPredicted RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 CYTH3O43739 400 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 SLC4A1P02730 911 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 PECAM1P16284 738 aaPredicted RBP7.22□□□□□ -1.25
SORT1-209ENST00000538502 XRCC4Q13426 336 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 LRRC74BQ6ZQY2 392 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 MIEF2Q96C03 454 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 RMND5AQ9H871 391 aa7.22□□□□□ -1.25
SORT1-209ENST00000538502 MYO1GB0I1T2 1018 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 FAM25AB3EWG3 89 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 FAM25CB3EWG5 89 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 FAM25GB3EWG6 89 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 CBFA2T3O75081 653 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 TKTP29401 623 aaKnown RBP7.21□□□□□ -1.25
SORT1-209ENST00000538502 PPIDQ08752 370 aaKnown RBP7.21□□□□□ -1.25
SORT1-209ENST00000538502 PDK1Q15118 436 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 SLC10A5Q5PT55 438 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 C12orf60Q5U649 245 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 CNKSR1Q969H4 720 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 VPS33AQ96AX1 596 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 C18orf8Q96DM3 657 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 MTERF3Q96E29 417 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 OMA1Q96E52 524 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 MED15Q96RN5 788 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 CLEC4MQ9H2X3 399 aaPredicted RBP7.21□□□□□ -1.25
SORT1-209ENST00000538502 DHX35Q9H5Z1 703 aaKnown RBP7.21□□□□□ -1.25
SORT1-209ENST00000538502 TMEM161AQ9NX61 479 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 VTI1BQ9UEU0 232 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 MYRFQ9Y2G1 1151 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 CAMSAP1Q5T5Y3 1602 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 ARIH2O95376 493 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 MAPK1P28482 360 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 SLC16A2P36021 539 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 ACADSBP45954 432 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 KLHL12Q53G59 568 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 UGT3A1Q6NUS8 523 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 PID1Q7Z2X4 250 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 CD302Q8IX05 232 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 NUP93Q8N1F7 819 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 RTL3Q8N8U3 475 aaKnown RBP7.21□□□□□ -1.25
SORT1-209ENST00000538502 OSCP1Q8WVF1 389 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 PTPRN2Q92932 1015 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 POP5Q969H6 163 aaKnown RBP7.21□□□□□ -1.25
SORT1-209ENST00000538502 EIF2AK1Q9BQI3 630 aaKnown RBP7.21□□□□□ -1.25
SORT1-209ENST00000538502 NAT9Q9BTE0 207 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 LMCD1Q9NZU5 365 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 SORCS3Q9UPU3 1222 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 UTYO14607 1347 aa7.21□□□□□ -1.25
SORT1-209ENST00000538502 SMIM31A0A1B0GVY4 71 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 CENPXA8MT69 81 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 UBAP1LF5GYI3 381 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 NEMP1O14524 444 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 CAND2O75155 1236 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 KATNA1O75449 491 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 PDHBP11177 359 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 ANXA11P50995 505 aaKnown RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 XIAPP98170 497 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 BNC1Q01954 994 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 MAPRE1Q15691 268 aaKnown RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 SLC27A3Q5K4L6 730 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 TTC27Q6P3X3 843 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 KRT73Q86Y46 540 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 SLC13A5Q86YT5 568 aaPredicted RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.21□□□□□ -1.26
SORT1-209ENST00000538502 ZSWIM1Q9BR11 485 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 ALG13Q9NP73 1137 aaKnown RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 FBXO40Q9UH90 709 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 CORO1CQ9ULV4 474 aaPredicted RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 A0A087WXM4 84 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 TCP10L2B9ZVM9 353 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 MCAMP43121 646 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 CHRNB3Q05901 458 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 NCF4Q15080 339 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 MTFR1Q15390 333 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 ZNF568Q3ZCX4 644 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 MEI1Q5TIA1 1274 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 GADL1Q6ZQY3 521 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 LRRC8DQ7L1W4 858 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 SETD9Q8NE22 299 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 RMND5BQ96G75 393 aaPredicted RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 PAGR1Q9BTK6 254 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 RAB6BQ9NRW1 208 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 PCSK1NQ9UHG2 260 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 ECM2O94769 699 aaPredicted RBP7.21□□□□□ -1.26
SORT1-209ENST00000538502 DDR1Q08345 913 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 RASA2Q15283 850 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 LRRC6Q86X45 466 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 MAGEC3Q8TD91 643 aa7.21□□□□□ -1.26
SORT1-209ENST00000538502 WDR60Q8WVS4 1066 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms