RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 SOWAHAQ2M3V2 549 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 ZNF394Q53GI3 561 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 DCLRE1AQ6PJP8 1040 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 NYAP1Q6ZVC0 841 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 ADGRF2Q8IZF7 708 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 TMEM86AQ8N2M4 240 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 SLC4A11Q8NBS3 891 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 WHAMMQ8TF30 809 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 TMEM176AQ96HP8 235 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 FAM193BQ96PV7 902 aaPredicted RBP13.16□□□□□ -0.3
DDB1-209ENST00000537877 ELOVL4Q9GZR5 314 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 L1RE1Q9UN81 338 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 TSC2P49815 1807 aa13.16□□□□□ -0.3
DDB1-209ENST00000537877 BTNL10A8MVZ5 291 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 CYB561D2O14569 222 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 RTN2O75298 545 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 LSM8O95777 96 aaKnown RBP13.15□□□□□ -0.3
DDB1-209ENST00000537877 AMHP03971 560 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 H2AFZP0C0S5 128 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 VDRP11473 427 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 ODC1P11926 461 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 PPIGQ13427 754 aaKnown RBP eCLIP13.15□□□□□ -0.34e-6■■■■□ 19.6
DDB1-209ENST00000537877 STILQ15468 1287 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 CLEC16AQ2KHT3 1053 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 H2AFVQ71UI9 128 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 COLGALT2Q8IYK4 626 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 LRRC43Q8N309 656 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 ZNF606Q8WXB4 792 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 SENP8Q96LD8 212 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 C16orf45Q96MC5 204 aaPredicted RBP13.15□□□□□ -0.3
DDB1-209ENST00000537877 TWNKQ96RR1 684 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 PCDHB18PQ96TA0 734 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 MRPL45Q9BRJ2 306 aaKnown RBP13.15□□□□□ -0.3
DDB1-209ENST00000537877 ISCUQ9H1K1 167 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 PDCL3Q9H2J4 239 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 SNX25Q9H3E2 840 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 LZTFL1Q9NQ48 299 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 MYO1AQ9UBC5 1043 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 CACNG4Q9UBN1 327 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 HMGXB4Q9UGU5 601 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
DDB1-209ENST00000537877 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
DDB1-209ENST00000537877 FNDC1Q4ZHG4 1894 aaPredicted RBP13.15□□□□□ -0.3
DDB1-209ENST00000537877 RCCD1A6NED2 376 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 B3GAT3O94766 335 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 DDHD2O94830 711 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
DDB1-209ENST00000537877 CD19P15391 556 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 BRD2P25440 801 aaKnown RBP13.14□□□□□ -0.31
DDB1-209ENST00000537877 SGO2Q562F6 1265 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 DSTYKQ6XUX3 929 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDB1-209ENST00000537877 PALB2Q86YC2 1186 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 ZNF280BQ86YH2 543 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 PDCL2Q8N4E4 241 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 OR6B3Q8NGW1 331 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 TNIP3Q96KP6 325 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 PAAF1Q9BRP4 392 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 TMEM175Q9BSA9 504 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 HTATIP2Q9BUP3 242 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 LACRTQ9GZZ8 138 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 DSEQ9UL01 958 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 CEP83Q9Y592 693 aa13.14□□□□□ -0.31
DDB1-209ENST00000537877 NCANO14594 1321 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 A0A0A6YYK5 440 aaPredicted RBP13.13□□□□□ -0.31
DDB1-209ENST00000537877 A0A0U1RQJ8 604 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 ANKRD62A6NC57 917 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 A8MXQ7 604 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 M0QZQ0 153 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 GABRDO14764 452 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 KIF5CO60282 957 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 B4GALT3O60512 393 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 KIF4AO95239 1232 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 CALCAP01258 141 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 CYP11A1P05108 521 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 TMEM253P0C7T8 217 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 UNGP13051 313 aaPredicted RBP13.13□□□□□ -0.31
DDB1-209ENST00000537877 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
DDB1-209ENST00000537877 GNL1P36915 607 aaPredicted RBP13.13□□□□□ -0.31
DDB1-209ENST00000537877 LHX1P48742 406 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 WDR5P61964 334 aaKnown RBP13.13□□□□□ -0.31
DDB1-209ENST00000537877 NOMO3P69849 1222 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 CENPCQ03188 943 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 TIGD5Q53EQ6 642 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 ACAD10Q6JQN1 1059 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 CRYBG2Q8N1P7 616 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 ATRIPQ8WXE1 791 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
DDB1-209ENST00000537877 TFAP2BQ92481 460 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 TRIM11Q96F44 468 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 SUSD3Q96L08 255 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 PACSIN1Q9BY11 444 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 ZNF518BQ9C0D4 1074 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms