RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MYBL2P10244 700 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 MALP21145 153 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 DRD4P21917 467 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 NDUFV1P49821 464 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 SOX10P56693 466 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 FAM153CQ494X1 144 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 TAF2Q6P1X5 1199 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 ZNF366Q8N895 744 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 C9orf106Q8NAJ2 232 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 PBKQ96KB5 322 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 TEKT5Q96M29 485 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 AMBRA1Q9C0C7 1298 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 PUS7LQ9H0K6 701 aaKnown RBP6.81□□□□□ -1.32
CCDC7-208ENST00000537047 CALCOCO1Q9P1Z2 691 aa6.81□□□□□ -1.32
CCDC7-208ENST00000537047 E7ENX8 843 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 TP73O15350 636 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 TTLL1O95922 423 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 HNRNPCP07910 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
CCDC7-208ENST00000537047 NHLRC4P0CG21 123 aaPredicted RBP6.8□□□□□ -1.32
CCDC7-208ENST00000537047 PCSK6P29122 969 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 CCT8P50990 548 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 DSC2Q02487 901 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 TAP2Q03519 686 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 EZH2Q15910 746 aaKnown RBP6.8□□□□□ -1.32
CCDC7-208ENST00000537047 Q8N9P0 234 aaPredicted RBP6.8□□□□□ -1.32
CCDC7-208ENST00000537047 PSD4Q8NDX1 1056 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 NSUN6Q8TEA1 469 aaKnown RBP6.8□□□□□ -1.32
CCDC7-208ENST00000537047 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 ACTRT3Q9BYD9 372 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 SLAMF7Q9NQ25 335 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 TRHDEQ9UKU6 1024 aa6.8□□□□□ -1.32
CCDC7-208ENST00000537047 LINC01548A6NM66 108 aa6.79□□□□□ -1.32
CCDC7-208ENST00000537047 GJB1P08034 283 aa6.79□□□□□ -1.32
CCDC7-208ENST00000537047 JUPP14923 745 aa6.79□□□□□ -1.32
CCDC7-208ENST00000537047 UAP1L1Q3KQV9 507 aa6.79□□□□□ -1.32
CCDC7-208ENST00000537047 MTX3Q5HYI7 312 aa6.79□□□□□ -1.32
CCDC7-208ENST00000537047 ZNF626Q68DY1 528 aa6.79□□□□□ -1.32
CCDC7-208ENST00000537047 SEMA6DQ8NFY4 1073 aa6.79□□□□□ -1.32
CCDC7-208ENST00000537047 FKBP10Q96AY3 582 aa6.79□□□□□ -1.32
CCDC7-208ENST00000537047 GCOM1H8Y6P7 765 aaPredicted RBP6.78□□□□□ -1.32
CCDC7-208ENST00000537047 PRR35P0CG20 571 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 TOB1P50616 345 aaPredicted RBP6.78□□□□□ -1.32
CCDC7-208ENST00000537047 ZNF135P52742 658 aaPredicted RBP6.78□□□□□ -1.32
CCDC7-208ENST00000537047 EIF2B5Q13144 721 aaKnown RBP6.78□□□□□ -1.32
CCDC7-208ENST00000537047 MTMR1Q13613 665 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 ODF1Q14990 250 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 LLGL1Q15334 1064 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 RBM20Q5T481 1227 aaKnown RBP6.78□□□□□ -1.32
CCDC7-208ENST00000537047 VPS53Q5VIR6 699 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 SYDE2Q5VT97 1194 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 SLC4A10Q6U841 1118 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 ZNF66Q6ZN08 573 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 AOPEPQ8N6M6 819 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 SCAMP4Q969E2 229 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 BRD9Q9H8M2 597 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 SERHLQ9NQF3 203 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 FLRT1Q9NZU1 646 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 MCM8Q9UJA3 840 aa6.78□□□□□ -1.32
CCDC7-208ENST00000537047 TARM1B6A8C7 271 aa6.77□□□□□ -1.33
CCDC7-208ENST00000537047 KIF20AO95235 890 aa6.77□□□□□ -1.33
CCDC7-208ENST00000537047 ZFXP17010 805 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-208ENST00000537047 SSBP2P81877 361 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-208ENST00000537047 GRM1Q13255 1194 aa6.77□□□□□ -1.33
CCDC7-208ENST00000537047 KLF9Q13886 244 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-208ENST00000537047 HABP2Q14520 560 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-208ENST00000537047 TBCCQ15814 346 aa6.77□□□□□ -1.33
CCDC7-208ENST00000537047 SH2D3AQ9BRG2 576 aa6.77□□□□□ -1.33
CCDC7-208ENST00000537047 SPATA31A3Q5VYP0 1347 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 TRIAP1O43715 76 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 ANXA1P04083 346 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 MPGP29372 298 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 BOP1Q14137 746 aaKnown RBP6.76□□□□□ -1.33
CCDC7-208ENST00000537047 EGFLAMQ63HQ2 1017 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 NECAB2Q7Z6G3 386 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 PDSS2Q86YH6 399 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 SERTAD4Q9NUC0 356 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 EHD3Q9NZN3 535 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 ATP8A1Q9Y2Q0 1164 aa6.76□□□□□ -1.33
CCDC7-208ENST00000537047 GABRDO14764 452 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 CLSTN1O94985 981 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 LATS1O95835 1130 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 KIAA1614Q5VZ46 1190 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 PPP4R3AQ6IN85 833 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 REPS1Q96D71 796 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 OSBPL9Q96SU4 736 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 ALG8Q9BVK2 526 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 SH3BP4Q9P0V3 963 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 PRKAB1Q9Y478 270 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 PCDHA3Q9Y5H8 950 aa6.75□□□□□ -1.33
CCDC7-208ENST00000537047 ZNF213O14771 459 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 PPM1DO15297 605 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 KATNA1O75449 491 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 SP2Q02086 613 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 ITKQ08881 620 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 SLC10A2Q12908 348 aaPredicted RBP6.74□□□□□ -1.33
CCDC7-208ENST00000537047 ETFDHQ16134 617 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 SUMO4Q6EEV6 95 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 TTC7BQ86TV6 843 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 KLHDC4Q8TBB5 520 aa6.74□□□□□ -1.33
CCDC7-208ENST00000537047 QTRT1Q9BXR0 403 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms