RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PARM1Q6UWI2 310 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SUGP1Q8IWZ8 645 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 GPT2Q8TD30 523 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ING5Q8WYH8 240 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CCDC47Q96A33 483 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CORO1BQ9BR76 489 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 RPP25Q9BUL9 199 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 KIAA1586Q9HCI6 787 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 INTS13Q9NVM9 706 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ITGA11Q9UKX5 1188 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 MRPS23Q9Y3D9 190 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 YIPF1Q9Y548 306 aa19.25■□□□□ 0.67
TNFRSF1A-209ENST00000536717 NRG2O14511 850 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 TMEM191BP0C7N4 346 aa19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PRR29P0C7W0 189 aa19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CCR2P41597 374 aa19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SNRNP35Q16560 246 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 KNOP1Q1ED39 458 aaKnown RBP19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 HS2ST1Q7LGA3 356 aa19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CSGALNACT2Q8N6G5 542 aa19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 RDH13Q8NBN7 331 aa19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ATAD1Q8NBU5 361 aa19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 OR5B17Q8NGF7 314 aa19.24■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CEBPBP17676 345 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CYP2J2P51589 502 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 DPYDQ12882 1025 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PNOCQ13519 176 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SURF1Q15526 300 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 IER5LQ5T953 404 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 METTL23Q86XA0 190 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 C12orf56Q8IXR9 622 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 HS6ST3Q8IZP7 471 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 TTC9BQ8N6N2 239 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 LRRC52Q8N7C0 313 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 XXYLT1Q8NBI6 393 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 TCEAL4Q96EI5 215 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ANKRD36BP1Q96IX9 119 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ZCWPW1Q9H0M4 648 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 DNAJC25Q9H1X3 360 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 EXOC1Q9NV70 894 aa19.23■□□□□ 0.67
TNFRSF1A-209ENST00000536717 OBSL1O75147 1896 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SMC2O95347 1197 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 KRT19P08727 400 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SRFP11831 508 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PSMD2Q13200 908 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 LRRTM3Q86VH5 581 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ELMOD1Q8N336 334 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ZNF512Q96ME7 567 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 KCNH6Q9H252 994 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CGNQ9P2M7 1197 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 L1RE1Q9UN81 338 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SLC27A5Q9Y2P5 690 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PTPRDP23468 1912 aa19.22■□□□□ 0.67
TNFRSF1A-209ENST00000536717 ZNF638Q14966 1978 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 RPN1P04843 607 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 AVPR2P30518 371 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 EPHA5P54756 1037 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 RBP5P82980 135 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CYP24A1Q07973 514 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 SLC39A12Q504Y0 691 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 IQCEQ6IPM2 695 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PDZD4Q76G19 769 aaPredicted RBP19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 WDR49Q8IV35 697 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 THEM5Q8N1Q8 247 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 MCRS1Q96EZ8 462 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 GZF1Q9H116 711 aaPredicted RBP19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 NUP62CLQ9H1M0 184 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 CLSTN2Q9H4D0 955 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 GDAP2Q9NXN4 497 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 HSFX1Q9UBD0 423 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 GREB1Q4ZG55 1949 aa19.21■□□□□ 0.67
TNFRSF1A-209ENST00000536717 NUP210Q8TEM1 1887 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 MOSPD3O75425 235 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 CFHP08603 1231 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 PLA2G5P39877 138 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 CDR1P51861 262 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 BFSP1Q12934 665 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 PSMD6Q15008 389 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 CAMK4Q16566 473 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 DUOXA2Q1HG44 320 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 MTSS1LQ765P7 747 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 SMARCE1Q969G3 411 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 LRRC3Q9BY71 257 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 KCTD10Q9H3F6 313 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 RMND1Q9NWS8 449 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 GDE1Q9NZC3 331 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 WNT16Q9UBV4 365 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 SNX9Q9Y5X1 595 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 MIA3Q5JRA6 1907 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 ZNF197O14709 1029 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 SOAT2O75908 522 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 MICAL2O94851 1124 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 TNNC2P02585 160 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 DLATP10515 647 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 NPR3P17342 541 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 PLD1Q13393 1074 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 CYP4A22Q5TCH4 519 aa19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 CWF19L1Q69YN2 538 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-209ENST00000536717 TMC8Q8IU68 726 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms