RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CPB1P15086 417 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 PNPLA4P41247 253 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 TAF6P49848 677 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 CASP5P51878 434 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 ARPP19P56211 112 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 AMPD3Q01432 767 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 PFKPQ01813 784 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 PRKCQQ04759 706 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 SMARCB1Q12824 385 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 PLD1Q13393 1074 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 IQCEQ6IPM2 695 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 CENPPQ6IPU0 288 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 STXBP4Q6ZWJ1 553 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 EFCAB13Q8IY85 973 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 ELMOD1Q8N336 334 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 TMEM130Q8N3G9 435 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 IQUBQ8NA54 791 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 KCNG4Q8TDN1 519 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 ELSPBP1Q96BH3 223 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 SHDQ96IW2 340 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 ZNF512Q96ME7 567 aaPredicted RBP11.67□□□□□ -0.54
CCDC60-202ENST00000535685 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
CCDC60-202ENST00000535685 LRRC3Q9BY71 257 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 PANK2Q9BZ23 570 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 TRIM9Q9C026 710 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 TRPV4Q9HBA0 871 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 ARHGEF3Q9NR81 526 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 CEP72Q9P209 647 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 TFIP11Q9UBB9 837 aaKnown RBP11.67□□□□□ -0.54
CCDC60-202ENST00000535685 ASB3Q9Y575 518 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 VPS13AQ96RL7 3174 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 SPTBN4Q9H254 2564 aa11.67□□□□□ -0.54
CCDC60-202ENST00000535685 EIF3DO15371 548 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC60-202ENST00000535685 PI15O43692 258 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 EXTL3O43909 919 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 MOSPD3O75425 235 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 NBL1P41271 181 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 GPC5P78333 572 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 EHHADHQ08426 723 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 TWF1Q12792 350 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 CYP4A22Q5TCH4 519 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 SHC4Q6S5L8 630 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 PDILTQ8N807 584 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 DTWD2Q8NBA8 298 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 RDH13Q8NBN7 331 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 FLCNQ8NFG4 579 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 SPATA18Q8TC71 538 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 C2orf15Q8WU43 125 aaKnown RBP11.66□□□□□ -0.54
CCDC60-202ENST00000535685 CACTINQ8WUQ7 758 aaKnown RBP11.66□□□□□ -0.54
CCDC60-202ENST00000535685 C7orf25Q9BPX7 421 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 CORO1BQ9BR76 489 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 OSBPL6Q9BZF3 934 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 GPR88Q9GZN0 384 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 IKZF4Q9H2S9 585 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 TBC1D17Q9HA65 648 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 TBC1D7Q9P0N9 293 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 DLGAP2Q9P1A6 1054 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 YIPF1Q9Y548 306 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 TIMM13Q9Y5L4 95 aaPredicted RBP11.66□□□□□ -0.54
CCDC60-202ENST00000535685 OTOGLQ3ZCN5 2332 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 GREB1Q4ZG55 1949 aa11.66□□□□□ -0.54
CCDC60-202ENST00000535685 WDR87Q6ZQQ6 2873 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 MTMR11A4FU01 709 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 CEBPBP17676 345 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 FCARP24071 287 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 CCR2P41597 374 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 SNRPFP62306 86 aaKnown RBP11.65□□□□□ -0.54
CCDC60-202ENST00000535685 SV2CQ496J9 727 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 ARMCX5Q6P1M9 558 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 PDZD4Q76G19 769 aaPredicted RBP11.65□□□□□ -0.54
CCDC60-202ENST00000535685 EPM2AIP1Q7L775 607 aaPredicted RBP11.65□□□□□ -0.54
CCDC60-202ENST00000535685 SYCP3Q8IZU3 236 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 LRRC52Q8N7C0 313 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 CXorf38Q8TB03 319 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 ZNF507Q8TCN5 953 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 ATOH1Q92858 354 aaPredicted RBP11.65□□□□□ -0.54
CCDC60-202ENST00000535685 TCEAL4Q96EI5 215 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 MCRS1Q96EZ8 462 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 ZNF560Q96MR9 790 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 ASB16Q96NS5 453 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 PYM1Q9BRP8 204 aaKnown RBP11.65□□□□□ -0.54
CCDC60-202ENST00000535685 FAM213AQ9BRX8 229 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 FGFBP2Q9BYJ0 223 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 ZCWPW1Q9H0M4 648 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 DNAJC25Q9H1X3 360 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 CRISPLD1Q9H336 500 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 TRPV5Q9NQA5 729 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 ASAH2Q9NR71 780 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 RCOR1Q9UKL0 485 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 CFAP45Q9UL16 551 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 CA14Q9ULX7 337 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 COL4A2P08572 1712 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 OBSL1O75147 1896 aa11.65□□□□□ -0.54
CCDC60-202ENST00000535685 PATJQ8NI35 1801 aa11.65□□□□□ -0.55
CCDC60-202ENST00000535685 PTPRDP23468 1912 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 ANAPC1Q9H1A4 1944 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 UBE4BO95155 1302 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
CCDC60-202ENST00000535685 KPNA7A9QM74 516 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms