RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 AKAP3O75969 853 aa23.47■■□□□ 1.35
SSPN-204ENST00000535504 FGFR1OPO95684 399 aaKnown RBP23.47■■□□□ 1.35
SSPN-204ENST00000535504 TRIM21P19474 475 aaKnown RBP23.47■■□□□ 1.35
SSPN-204ENST00000535504 GPR17Q13304 367 aa23.47■■□□□ 1.35
SSPN-204ENST00000535504 MORC3Q14149 939 aa23.47■■□□□ 1.35
SSPN-204ENST00000535504 ZCWPW2Q504Y3 356 aa23.47■■□□□ 1.35
SSPN-204ENST00000535504 IQCEQ6IPM2 695 aa23.47■■□□□ 1.35
SSPN-204ENST00000535504 TCEAL8Q8IYN2 117 aa23.47■■□□□ 1.35
SSPN-204ENST00000535504 PLCD3Q8N3E9 789 aa23.47■■□□□ 1.35
SSPN-204ENST00000535504 C2orf15Q8WU43 125 aaKnown RBP23.47■■□□□ 1.35
SSPN-204ENST00000535504 CLSTN2Q9H4D0 955 aa23.47■■□□□ 1.35
SSPN-204ENST00000535504 CCL16O15467 120 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 CLUHO75153 1309 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 NCOR1O75376 2440 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 POU2F2P09086 479 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 PIK3CAP42336 1068 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 PAK1Q13153 545 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 NCOA4Q13772 614 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 ZNF699Q32M78 642 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 WDR72Q3MJ13 1102 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 PDCL2Q8N4E4 241 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 SNX25Q9H3E2 840 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 WDR6Q9NNW5 1121 aaKnown RBP23.46■■□□□ 1.35
SSPN-204ENST00000535504 DDX43Q9NXZ2 648 aaKnown RBP23.46■■□□□ 1.35
SSPN-204ENST00000535504 USTQ9Y2C2 406 aa23.46■■□□□ 1.35
SSPN-204ENST00000535504 SP100P23497 879 aaPredicted RBP23.45■■□□□ 1.34
SSPN-204ENST00000535504 ALDH1A3P47895 512 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 CLDN10P78369 228 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 NFE2Q16621 373 aaPredicted RBP23.45■■□□□ 1.34
SSPN-204ENST00000535504 SLC39A12Q504Y0 691 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 ZNF667Q5HYK9 610 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 TCERG1LQ5VWI1 586 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 ANKRD40Q6AI12 368 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 NELFBQ8WX92 580 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 BORCS6Q96GS4 357 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 FAM84AQ96KN4 292 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 PGLYRP2Q96PD5 576 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 DNAI2Q9GZS0 605 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 MMRN2Q9H8L6 949 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 METTL14Q9HCE5 456 aaKnown RBP23.45■■□□□ 1.34
SSPN-204ENST00000535504 DACH1Q9UI36 760 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 L1RE1Q9UN81 338 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 CTNND2Q9UQB3 1225 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 INSL5Q9Y5Q6 135 aa23.45■■□□□ 1.34
SSPN-204ENST00000535504 STAU1O95793 577 aaKnown RBP23.44■■□□□ 1.34
SSPN-204ENST00000535504 OR4Q2P0C623 313 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 GBP2P32456 591 aaPredicted RBP23.44■■□□□ 1.34
SSPN-204ENST00000535504 GTF2H1P32780 548 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 SGSM1Q2NKQ1 1148 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 CCDC40Q4G0X9 1142 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 TDRD10Q5VZ19 366 aaKnown RBP23.44■■□□□ 1.34
SSPN-204ENST00000535504 RNF19BQ6ZMZ0 732 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 CXorf38Q8TB03 319 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 TAF4BQ92750 862 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 ZNF512Q96ME7 567 aaPredicted RBP23.44■■□□□ 1.34
SSPN-204ENST00000535504 CEP63Q96MT8 703 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 ACBD6Q9BR61 282 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 ZCWPW1Q9H0M4 648 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 LMBRD1Q9NUN5 540 aa23.44■■□□□ 1.34
SSPN-204ENST00000535504 C19orf67A6NJJ6 358 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 LOC730098B7Z3J9 87 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 MBD3O95983 291 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 FAM163BP0C2L3 166 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 TUFMP49411 452 aaKnown RBP23.43■■□□□ 1.34
SSPN-204ENST00000535504 EPHB3P54753 998 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 MYL6P60660 151 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 VEPH1Q14D04 833 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 MAPRE1Q15691 268 aaKnown RBP23.43■■□□□ 1.34
SSPN-204ENST00000535504 TAF12Q16514 161 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 DCAF17Q5H9S7 520 aaPredicted RBP23.43■■□□□ 1.34
SSPN-204ENST00000535504 SPPL2BQ8TCT7 592 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 ZNF516Q92618 1163 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 ZNF707Q96C28 371 aaPredicted RBP23.43■■□□□ 1.34
SSPN-204ENST00000535504 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.43■■□□□ 1.34
SSPN-204ENST00000535504 HSFX1Q9UBD0 423 aa23.43■■□□□ 1.34
SSPN-204ENST00000535504 NXF1Q9UBU9 619 aaKnown RBP23.43■■□□□ 1.34
SSPN-204ENST00000535504 ARMCX3Q9UH62 379 aaPredicted RBP23.43■■□□□ 1.34
SSPN-204ENST00000535504 TRIM49BA6NDI0 452 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 CST3P01034 146 aaPredicted RBP23.42■■□□□ 1.34
SSPN-204ENST00000535504 C4BPAP04003 597 aaKnown RBP23.42■■□□□ 1.34
SSPN-204ENST00000535504 ALADP13716 330 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 PTPN2P17706 415 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 FSHRP23945 695 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 DLG4P78352 724 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 MGAT5BQ3V5L5 792 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 ZACNQ401N2 412 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 PABPC1LQ4VXU2 614 aaKnown RBP23.42■■□□□ 1.34
SSPN-204ENST00000535504 KRT39Q6A163 491 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 FOXR2Q6PJQ5 311 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 SV2AQ7L0J3 742 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 GET4Q7L5D6 327 aaPredicted RBP23.42■■□□□ 1.34
SSPN-204ENST00000535504 GRASPQ7Z6J2 395 aaPredicted RBP23.42■■□□□ 1.34
SSPN-204ENST00000535504 LEMD2Q8NC56 503 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 OR10T2Q8NGX3 314 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 FAM200AQ8TCP9 573 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 PLEKHO2Q8TD55 490 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 TMEM8AQ9HCN3 771 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 CDH22Q9UJ99 828 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 PCDHB5Q9Y5E4 795 aa23.42■■□□□ 1.34
SSPN-204ENST00000535504 TTC28Q96AY4 2481 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms