RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 C2orf15Q8WU43 125 aaKnown RBP20.33■□□□□ 0.85
NDUFS3-213ENST00000534716 DEPDC1BQ8WUY9 529 aa20.33■□□□□ 0.85
NDUFS3-213ENST00000534716 IRF7Q92985 503 aa20.33■□□□□ 0.85
NDUFS3-213ENST00000534716 PYM1Q9BRP8 204 aaKnown RBP20.33■□□□□ 0.85
NDUFS3-213ENST00000534716 BCO2Q9BYV7 579 aa20.33■□□□□ 0.85
NDUFS3-213ENST00000534716 KIAA0391O15091 583 aaKnown RBP20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 EXTL3O43909 919 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 LRRN2O75325 713 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 RPS9P46781 194 aaKnown RBP20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 WNT7BP56706 349 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 UBXN2BQ14CS0 331 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 WSCD1Q658N2 575 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 TPRG1Q6ZUI0 275 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 ITIH5Q86UX2 942 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 MFSD6LQ8IWD5 586 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 MAML2Q8IZL2 1156 aaPredicted RBP20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 SYCP3Q8IZU3 236 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 TTC9BQ8N6N2 239 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 ZSWIM2Q8NEG5 633 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 CXorf38Q8TB03 319 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 ZNF560Q96MR9 790 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 HEBP1Q9NRV9 189 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 RBAKQ9NYW8 714 aaPredicted RBP20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 TSC2P49815 1807 aa20.32■□□□□ 0.84
NDUFS3-213ENST00000534716 ANK1P16157 1881 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 A0A1W2PRU2 124 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 CUTAO60888 179 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 SP9P0CG40 484 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 GJA1P17302 382 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 WEE1P30291 646 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 MLLT6P55198 1093 aaPredicted RBP20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 AMPD3Q01432 767 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 FZD5Q13467 585 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 ZNF528Q3MIS6 628 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 SLC39A12Q504Y0 691 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 GAREM2Q75VX8 874 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 ZNF687Q8N1G0 1237 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 LRRC52Q8N7C0 313 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 C1orf127Q8N9H9 656 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 CACTINQ8WUQ7 758 aaKnown RBP20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 SAAL1Q96ER3 474 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 CBWD1Q9BRT8 395 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 TRIM9Q9C026 710 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 BRD9Q9H8M2 597 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 ZNF334Q9HCZ1 680 aaPredicted RBP20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 TFIP11Q9UBB9 837 aaKnown RBP20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 FBXO4Q9UKT5 387 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 ITGA11Q9UKX5 1188 aa20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 MRPS17Q9Y2R5 130 aaKnown RBP20.31■□□□□ 0.84
NDUFS3-213ENST00000534716 COL4A3Q01955 1670 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 ARNTLO00327 626 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 MAN2B1O00754 1011 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 NCAM2O15394 837 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 CD72P21854 359 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 TARSP26639 723 aaKnown RBP20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 VIPR2P41587 438 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 TFAMQ00059 246 aaKnown RBP20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 GRM2Q14416 872 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 STXBP4Q6ZWJ1 553 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 LRRTM3Q86VH5 581 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 SPPL2BQ8TCT7 592 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 MKNK1Q9BUB5 465 aa20.3■□□□□ 0.84
NDUFS3-213ENST00000534716 FRYLO94915 3013 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 EIF3DO15371 548 aaKnown RBP eCLIP20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 SOAT2O75908 522 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 PRPF6O94906 941 aaKnown RBP20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 ITGB3P05106 788 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 POLR2BP30876 1174 aaKnown RBP20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 FCHO2Q0JRZ9 810 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 ZC3H14Q6PJT7 736 aaKnown RBP20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 SHC4Q6S5L8 630 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 DCP1BQ8IZD4 617 aaKnown RBP20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 GPD1LQ8N335 351 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 IQUBQ8NA54 791 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 SPATA18Q8TC71 538 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 MAGEF1Q9HAY2 307 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 GDAP2Q9NXN4 497 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 AGAP1Q9UPQ3 857 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 ZNF292O60281 2723 aa20.29■□□□□ 0.84
NDUFS3-213ENST00000534716 NCANO14594 1321 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 HEPACAM2A8MVW5 462 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 ZNF263O14978 683 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 ZSCAN22P10073 491 aaPredicted RBP20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 HAPLN1P10915 354 aaPredicted RBP20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 ATF6P18850 670 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 GDI1P31150 447 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 ATL3Q6DD88 541 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 MAMSTRQ6ZN01 415 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 EPM2AIP1Q7L775 607 aaPredicted RBP20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 TMEM86AQ8N2M4 240 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 PDCL2Q8N4E4 241 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 KCNG4Q8TDN1 519 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 LEO1Q8WVC0 666 aaPredicted RBP20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 SEPT5Q99719 369 aaPredicted RBP20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 C7orf25Q9BPX7 421 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 ACBD6Q9BR61 282 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 PCIF1Q9H4Z3 704 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 SLITRK6Q9H5Y7 841 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 OBP2AQ9NY56 170 aa20.28■□□□□ 0.84
NDUFS3-213ENST00000534716 GOLGA8IPA6NC78 632 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms