RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 HAPLN1P10915 354 aaPredicted RBP11.2□□□□□ -0.62
CSDE1-217ENST00000534699 PPP3CCP48454 512 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 MRE11P49959 708 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 MCCD1P59942 119 aaPredicted RBP11.2□□□□□ -0.62
CSDE1-217ENST00000534699 TWF1Q12792 350 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 DUOXA2Q1HG44 320 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 SIX5Q8N196 739 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 ASB16Q96NS5 453 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 DNAI2Q9GZS0 605 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 SCAND2PQ9GZW5 306 aaPredicted RBP11.2□□□□□ -0.62
CSDE1-217ENST00000534699 INTS13Q9NVM9 706 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 COMMD8Q9NX08 183 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 HUS1O60921 280 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 CSH1P0DML2 217 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 CSH2P0DML3 217 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 ACOT2P49753 483 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 PSMD6Q15008 389 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 ARHGAP29Q52LW3 1261 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 SLC44A4Q53GD3 710 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 SHC4Q6S5L8 630 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 ITFG1Q8TB96 612 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 SIT1Q9Y3P8 196 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 A0A1W2PQ27 194 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 A0A1W2PQ64 194 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 A0A1W2PQD8 194 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 I3L4J1 428 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 CHADO15335 359 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 KRT85P78386 507 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 PPP2R5DQ14738 602 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 TMC8Q8IU68 726 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 SYNPOQ8N3V7 929 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 PJA1Q8NG27 643 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 ATOH1Q92858 354 aaPredicted RBP11.19□□□□□ -0.62
CSDE1-217ENST00000534699 CORO1BQ9BR76 489 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 BCO2Q9BYV7 579 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 TASP1Q9H6P5 420 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 SCN1AP35498 2009 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 KRBA1A5PL33 1030 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 GABRDO14764 452 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 TACC1O75410 805 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 TMEM191BP0C7N4 346 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 MYBP10242 640 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 PSMC3P17980 439 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 WARSP23381 471 aaKnown RBP11.19□□□□□ -0.62
CSDE1-217ENST00000534699 ASIC1P78348 528 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 SEZ6Q53EL9 994 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 ZBTB41Q5SVQ8 909 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 PARM1Q6UWI2 310 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 C4orf50Q6ZRC1 276 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 EFCAB13Q8IY85 973 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 GPR152Q8TDT2 470 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 TAF4BQ92750 862 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 CGRRF1Q99675 332 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 FAM213AQ9BRX8 229 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 TRMT61BQ9BVS5 477 aaKnown RBP11.19□□□□□ -0.62
CSDE1-217ENST00000534699 DLGAP2Q9P1A6 1054 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 RAPGEFL1Q9UHV5 662 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 CDH9Q9ULB4 789 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 POLIQ9UNA4 740 aa11.19□□□□□ -0.62
CSDE1-217ENST00000534699 A0A087X0B3 334 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 NOL4O94818 638 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 FCARP24071 287 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 CFAP221Q4G0U5 840 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 SPECC1Q5M775 1068 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 VSTM1Q6UX27 236 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 GPR161Q8N6U8 529 aaKnown RBP11.18□□□□□ -0.62
CSDE1-217ENST00000534699 XXYLT1Q8NBI6 393 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 CXorf38Q8TB03 319 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 FAM212AQ96EL1 285 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 SPATA17Q96L03 361 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 MYRFLQ96LU7 910 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 CEP72Q9P209 647 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 PCDHA7Q9UN72 937 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 MOSPD3O75425 235 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 PAPSS2O95340 614 aaPredicted RBP11.18□□□□□ -0.62
CSDE1-217ENST00000534699 CEBPBP17676 345 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 CLDN10P78369 228 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 AMPD2Q01433 879 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 FCHO2Q0JRZ9 810 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 LRRC32Q14392 662 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 DGKKQ5KSL6 1271 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 FGF14Q92915 247 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 THG1LQ9NWX6 298 aaKnown RBP11.18□□□□□ -0.62
CSDE1-217ENST00000534699 HSPBP1Q9NZL4 362 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 OBSL1O75147 1896 aa11.18□□□□□ -0.62
CSDE1-217ENST00000534699 SPTLC1O15269 473 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 VNN2O95498 520 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 CFHP08603 1231 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 SP100P23497 879 aaPredicted RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 ME1P48163 572 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 ARPP19P56211 112 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 NTHL1P78549 312 aa11.17□□□□□ -0.62
CSDE1-217ENST00000534699 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 KNOP1Q1ED39 458 aaKnown RBP11.17□□□□□ -0.62
CSDE1-217ENST00000534699 INTS6LQ5JSJ4 861 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms