RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, human

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC17-215	ENST00000534417	ATF7IP2	Q5U623	682 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	LLGL2	Q6P1M3	1020 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	DNAJC24	Q6P3W2	148 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	PIGW	Q7Z7B1	504 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	NCAPG2	Q86XI2	1143 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	PASD1	Q8IV76	773 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	ANKRD13A	Q8IZ07	590 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	ZCCHC9	Q8N567	271 aa	Known RBP	11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	WDTC1	Q8N5D0	677 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	ATG4A	Q8WYN0	398 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	SCLT1	Q96NL6	688 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	MTMR12	Q9C0I1	747 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	PPCS	Q9HAB8	311 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	PPAN	Q9NQ55	473 aa	Known RBP	11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	NINJ2	Q9NZG7	142 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	WDR35	Q9P2L0	1181 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	RBPJL	Q9UBG7	517 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	PTPN22	Q9Y2R2	807 aa		11.12	□□□□□ -0.63
TTC17-215	ENST00000534417	hCG_1818297	A0A087WSY0	165 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	RBM47	A0AV96	593 aa	Known RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	SIGLEC16	A6NMB1	481 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417		O00370	1275 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	MED7	O43513	233 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	TJP3	O95049	919 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	ITGAV	P06756	1048 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CHN1	P15882	459 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	POLR2B	P30876	1174 aa	Known RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CHKA	P35790	457 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	IFI35	P80217	286 aa	Predicted RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	TNFAIP2	Q03169	654 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	ITIH4	Q14624	930 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	STAT4	Q14765	748 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	ACAP1	Q15027	740 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	OASL	Q15646	514 aa	Known RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CNGA2	Q16280	664 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	LY6K	Q17RY6	165 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	ZNF699	Q32M78	642 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	TTC31	Q49AM3	519 aa	Predicted RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	UBAP2	Q5T6F2	1119 aa	Known RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	SPOCD1	Q6ZMY3	1216 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	GADL1	Q6ZQY3	521 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	ZNF365	Q70YC5	407 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	FASTKD5	Q7L8L6	764 aa	Known RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	ANKS1B	Q7Z6G8	1248 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	TDRP	Q86YL5	185 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	SULF1	Q8IWU6	871 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CACNA2D3	Q8IZS8	1091 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CNPY4	Q8N129	248 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	OTUD6B	Q8N6M0	293 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	ALLC	Q8N6M5	410 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	RNF149	Q8NC42	400 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CXorf38	Q8TB03	319 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	EPS8L3	Q8TE67	593 aa	Known RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	EMID1	Q96A84	441 aa	Predicted RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	DCPS	Q96C86	337 aa	Known RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	ANKRD36BP1	Q96IX9	119 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	SEC16B	Q96JE7	1060 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	TTC25	Q96NG3	672 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CDT1	Q9H211	546 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CYP3A43	Q9HB55	503 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	CEP83	Q9Y592	693 aa		11.11	□□□□□ -0.63
TTC17-215	ENST00000534417	MCM3AP	O60318	1980 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	PLXNB2	O15031	1838 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	FAM170A	A1A519	330 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	ASB14	A6NK59	587 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	C3orf70	A6NLC5	250 aa	Predicted RBP	11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	DNALI1	O14645	258 aa	Predicted RBP	11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	MAGEB2	O15479	319 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	C22orf31	O95567	290 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	KRT1	P04264	644 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	BRD2	P25440	801 aa	Known RBP	11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	ADCY8	P40145	1251 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	CDKN2B	P42772	138 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	GABRB2	P47870	512 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	SLC18A1	P54219	525 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	VCP	P55072	806 aa	Known RBP	11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	ACTN3	Q08043	901 aa	Predicted RBP	11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	NR1H3	Q13133	447 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	TRPC3	Q13507	836 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	SNX1	Q13596	522 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	ZNF268	Q14587	947 aa	Predicted RBP	11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	KCTD2	Q14681	263 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	AMHR2	Q16671	573 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	QPCT	Q16769	361 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	HSDL1	Q3SXM5	330 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	IZUMO3	Q5VZ72	239 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	GPAT2	Q6NUI2	795 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	EXOC3L1	Q86VI1	746 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	ERICH1	Q86X53	443 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	NT5DC4	Q86YG4	428 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	CCDC50	Q8IVM0	306 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	DHX37	Q8IY37	1157 aa	Known RBP	11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	TTC39C	Q8N584	583 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	NLGN2	Q8NFZ4	835 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	SLC35B2	Q8TB61	432 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	TFAP2B	Q92481	460 aa		11.1	□□□□□ -0.63
TTC17-215	ENST00000534417	MMP19	Q99542	508 aa		11.1	□□□□□ -0.63

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