RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CFAP157Q5JU67 520 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 PADI6Q6TGC4 694 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 SLC9A9Q8IVB4 645 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 DTX3LQ8TDB6 740 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 SLC20A1Q8WUM9 679 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 CTNNBL1Q8WYA6 563 aaPredicted RBP20.23■□□□□ 0.83
SMPD1-210ENST00000534405 SH2D3AQ9BRG2 576 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 SEPT11Q9NVA2 429 aaKnown RBP20.23■□□□□ 0.83
SMPD1-210ENST00000534405 PHTF1Q9UMS5 762 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 PCDHA3Q9Y5H8 950 aa20.23■□□□□ 0.83
SMPD1-210ENST00000534405 HMGB2P26583 209 aaKnown RBP20.22■□□□□ 0.83
SMPD1-210ENST00000534405 IL9RQ01113 521 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 MAP3K10Q02779 954 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 GSTM4Q03013 218 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 SLC45A4Q5BKX6 768 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 C10orf82Q8WW14 230 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 MPHOSPH6Q99547 160 aaKnown RBP20.22■□□□□ 0.83
SMPD1-210ENST00000534405 EHMT1Q9H9B1 1298 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 TBCCD1Q9NVR7 557 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 PODXLO00592 558 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 CCDC22O60826 627 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 COPB2P35606 906 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 PPP3CAQ08209 521 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 CLUL1Q15846 466 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 MFSD4BQ5TF39 518 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 RSBN1LQ6PCB5 846 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-210ENST00000534405 ARHGEF19Q8IW93 802 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 ECSITQ9BQ95 431 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 BTBD10Q9BSF8 475 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 KCNH7Q9NS40 1196 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 ANGPTL2Q9UKU9 493 aa20.22■□□□□ 0.83
SMPD1-210ENST00000534405 ZNF536O15090 1300 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 EMSYQ7Z589 1322 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 BIRC5O15392 142 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 GSC2O15499 205 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 DHX15O43143 795 aaKnown RBP20.21■□□□□ 0.83
SMPD1-210ENST00000534405 TNFAIP3P21580 790 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 CRABP2P29373 138 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 EMP3P54852 163 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 CYLC2Q14093 348 aaPredicted RBP20.21■□□□□ 0.83
SMPD1-210ENST00000534405 KIF22Q14807 665 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 CTC1Q2NKJ3 1217 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 NMD3Q96D46 503 aaKnown RBP20.21■□□□□ 0.83
SMPD1-210ENST00000534405 RIT2Q99578 217 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 CBWD1Q9BRT8 395 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 NFIBO00712 420 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 RNASEH1O60930 286 aaKnown RBP20.21■□□□□ 0.83
SMPD1-210ENST00000534405 HOXD12P35452 270 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 GRIA2P42262 883 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 DLGAP5Q15398 846 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 C1orf220Q5T0J3 134 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 IZUMO2Q6UXV1 221 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 RGS9BPQ6ZS82 235 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 ACAD11Q709F0 780 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 MIER3Q7Z3K6 550 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 PDCD7Q8N8D1 485 aaKnown RBP20.21■□□□□ 0.83
SMPD1-210ENST00000534405 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMPD1-210ENST00000534405 PLEKHO2Q8TD55 490 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 SNRNP27Q8WVK2 155 aaKnown RBP20.21■□□□□ 0.83
SMPD1-210ENST00000534405 ART4Q93070 314 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 DGCR14Q96DF8 476 aaKnown RBP20.21■□□□□ 0.83
SMPD1-210ENST00000534405 FAM81BQ96LP2 452 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 GMLQ99445 158 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 ZFP69BQ9UJL9 534 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 ZHX2Q9Y6X8 837 aa20.21■□□□□ 0.83
SMPD1-210ENST00000534405 TMEM150BA6NC51 233 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 HSD17B4P51659 736 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 SPP2Q13103 211 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 ZNF211Q13398 564 aaPredicted RBP20.2■□□□□ 0.82
SMPD1-210ENST00000534405 GRM2Q14416 872 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 ADAT2Q7Z6V5 191 aaKnown RBP20.2■□□□□ 0.82
SMPD1-210ENST00000534405 FAM160B2Q86V87 743 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 ALG3Q92685 438 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 TIMMDC1Q9NPL8 285 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 ZNF148Q9UQR1 794 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 WASF2Q9Y6W5 498 aa20.2■□□□□ 0.82
SMPD1-210ENST00000534405 A8MXQ7 604 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 PLA2G6O60733 806 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 PHF2O75151 1096 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 ZWINTO95229 277 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 CAP2P40123 477 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 PRPF4BQ13523 1007 aaKnown RBP20.19■□□□□ 0.82
SMPD1-210ENST00000534405 SPDYE2Q495Y8 402 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 CYP4X1Q8N118 509 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 AGPAT1Q99943 283 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 UBE2TQ9NPD8 197 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-210ENST00000534405 TMED5Q9Y3A6 229 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 ACTL7BQ9Y614 415 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 ANKRD62A6NC57 917 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 TRIM43BA6NCK2 446 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 TMEM247A6NEH6 219 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 PTGER2P43116 358 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 GCLMP48507 274 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 SH3D19Q5HYK7 790 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 B3GNT6Q6ZMB0 384 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 CCDC125Q86Z20 511 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 KAT5Q92993 513 aa20.19■□□□□ 0.82
SMPD1-210ENST00000534405 DNAJC1Q96KC8 554 aaKnown RBP20.19■□□□□ 0.82
SMPD1-210ENST00000534405 CDC42EP4Q9H3Q1 356 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms