RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PAPOLAP51003 745 aaKnown RBP20.41■□□□□ 0.86
CAPN1-226ENST00000533820 NOMO3P69849 1222 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 LACTBP83111 547 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-226ENST00000533820 CAV1Q03135 178 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 GBP7Q8N8V2 638 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-226ENST00000533820 RBBP8NLQ8NC74 664 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-226ENST00000533820 MAML1Q92585 1016 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 L3MBTL3Q96JM7 780 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-226ENST00000533820 ANKEF1Q9NU02 776 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 NOP53Q9NZM5 478 aaKnown RBP20.41■□□□□ 0.86
CAPN1-226ENST00000533820 VNN1O95497 513 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 NEFHP12036 1026 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 KRT76Q01546 638 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 EFTUD2Q15029 972 aaKnown RBP eCLIP20.41■□□□□ 0.862e-6■■■■■ 29.3
CAPN1-226ENST00000533820 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 PPP1R21Q6ZMI0 780 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 CCDC60Q8IWA6 550 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-226ENST00000533820 OR5B17Q8NGF7 314 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 MCEEQ96PE7 176 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 ARHGEF3Q9NR81 526 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 PAPOLBQ9NRJ5 636 aaKnown RBP20.41■□□□□ 0.86
CAPN1-226ENST00000533820 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
CAPN1-226ENST00000533820 LRRD1A4D1F6 860 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 SGK1O00141 431 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 CBX6O95503 412 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 KLRC2P26717 231 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 GCAP28676 217 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 SCNN1BP51168 640 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 RIPK1Q13546 671 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 MTMR2Q13614 643 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 SLC1A5Q15758 541 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 SMTNL2Q2TAL5 461 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 FBF1Q8TES7 1133 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 SUDS3Q9H7L9 328 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-226ENST00000533820 PRDM16Q9HAZ2 1276 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 AGO2Q9UKV8 859 aaKnown RBP20.4■□□□□ 0.86
CAPN1-226ENST00000533820 NUB1Q9Y5A7 615 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 H0Y3Z8 333 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 CYP1A1P04798 512 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-226ENST00000533820 PDIA2Q13087 525 aaKnown RBP20.4■□□□□ 0.86
CAPN1-226ENST00000533820 CUL2Q13617 745 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 NIPA1Q7RTP0 329 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 TRABD2AQ86V40 505 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 MYLK4Q86YV6 388 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-226ENST00000533820 FAM81BQ96LP2 452 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 TARS2Q9BW92 718 aaKnown RBP20.4■□□□□ 0.86
CAPN1-226ENST00000533820 EBF2Q9HAK2 575 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 FZD1Q9UP38 647 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 LINGO3P0C6S8 592 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 SNRPFP62306 86 aaKnown RBP20.4■□□□□ 0.86
CAPN1-226ENST00000533820 ATP11AP98196 1134 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 PRKCEQ02156 737 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 CYP4A22Q5TCH4 519 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 DCUN1D2Q6PH85 259 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 ABRAQ8N0Z2 381 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 ATG4CQ96DT6 458 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 ZNF570Q96NI8 536 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 HAPLN2Q9GZV7 340 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 LGALS13Q9UHV8 139 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 DCTN4Q9UJW0 460 aa20.4■□□□□ 0.86
CAPN1-226ENST00000533820 SMIM24O75264 130 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 NR3C2P08235 984 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 OVGP1Q12889 678 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 SETDB1Q15047 1291 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 ZACNQ401N2 412 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 CWF19L1Q69YN2 538 aaKnown RBP20.39■□□□□ 0.85
CAPN1-226ENST00000533820 CRELD2Q6UXH1 353 aaPredicted RBP20.39■□□□□ 0.85
CAPN1-226ENST00000533820 ZCCHC9Q8N567 271 aaKnown RBP20.39■□□□□ 0.85
CAPN1-226ENST00000533820 CNKSR1Q969H4 720 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 UTP4Q969X6 686 aaKnown RBP20.39■□□□□ 0.85
CAPN1-226ENST00000533820 CFAP57Q96MR6 1250 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 SLC38A10Q9HBR0 1119 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 RBAKQ9NYW8 714 aaPredicted RBP20.39■□□□□ 0.85
CAPN1-226ENST00000533820 CHKBQ9Y259 395 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 LIASO43766 372 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 ACO1P21399 889 aaKnown RBP20.39■□□□□ 0.85
CAPN1-226ENST00000533820 SFNP31947 248 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 ABCD1P33897 745 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 TRIM68Q6AZZ1 485 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 ANKRD23Q86SG2 305 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 AKT1S1Q96B36 256 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 SMC6Q96SB8 1091 aa20.39■□□□□ 0.85
CAPN1-226ENST00000533820 MRPL47Q9HD33 250 aaKnown RBP20.39■□□□□ 0.85
CAPN1-226ENST00000533820 PSTPIP1O43586 416 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 UNC5CO95185 931 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 KCNT1Q5JUK3 1230 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 SCARA5Q6ZMJ2 495 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 ASRGL1Q7L266 308 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 ENOSF1Q7L5Y1 443 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 KATNAL2Q8IYT4 538 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 FEZF2Q8TBJ5 459 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 TRIM11Q96F44 468 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 LRRC37BQ96QE4 947 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 TSC22D3Q99576 134 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 RNF146Q9NTX7 359 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 NKX1-2Q9UD57 310 aaPredicted RBP20.38■□□□□ 0.85
CAPN1-226ENST00000533820 ASMTLO95671 621 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 POTEJP0CG39 1038 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 SSTR1P30872 391 aa20.38■□□□□ 0.85
CAPN1-226ENST00000533820 BPIFB4P59827 614 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms