RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 USP6NLQ92738 828 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 SLCO2A1Q92959 643 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 EMID1Q96A84 441 aaPredicted RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 ZNF653Q96CK0 615 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 POP1Q99575 1024 aaKnown RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 ACO2Q99798 780 aaKnown RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 TARS2Q9BW92 718 aaKnown RBP10.3□□□□□ -0.76
CHKA-207ENST00000533728 IMPG2Q9BZV3 1241 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 HAPLN2Q9GZV7 340 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 GOLPH3Q9H4A6 298 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 CALCOCO1Q9P1Z2 691 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 PARP2Q9UGN5 583 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 GJD2Q9UKL4 321 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 PRDM4Q9UKN5 801 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 MTUS1Q9ULD2 1270 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 TRIP11Q15643 1979 aa10.3□□□□□ -0.76
CHKA-207ENST00000533728 GOLGA6CA6NDK9 693 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 NOP56O00567 594 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 ACKR2O00590 384 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 MAGEB2O15479 319 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 STRNO43815 780 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 FAM189A1O60320 539 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 B4GALT4O60513 344 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 ERLIN2O94905 339 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 IL18RAPO95256 599 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 VNN1O95497 513 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 LSM8O95777 96 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 ASS1P00966 412 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 IVLP07476 585 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 GOLGA6DP0CG33 693 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 KRT5P13647 590 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 COMTP21964 271 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 ECHS1P30084 290 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 MAPK4P31152 587 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 ACTN2P35609 894 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 FNTAP49354 379 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 DNA2P51530 1060 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 ZNF132P52740 706 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 RWDD2BP57060 319 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 NOP14P78316 857 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 FPGSQ05932 587 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 C1QBPQ07021 282 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 BIRC3Q13489 604 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 PLCB4Q15147 1175 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 LIN9Q5TKA1 542 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 TSHZ1Q6ZSZ6 1077 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 SYDE1Q6ZW31 735 aaPredicted RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 TRMT1LQ7Z2T5 733 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 CROCCP2Q86T23 111 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 DHX37Q8IY37 1157 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 TSEN2Q8NCE0 465 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 ALG3Q92685 438 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 RMDN1Q96DB5 314 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 ERP44Q9BS26 406 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 PAGR1Q9BTK6 254 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 ZNF518BQ9C0D4 1074 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 DDX47Q9H0S4 455 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 NKX2-4Q9H2Z4 354 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 FZD8Q9H461 694 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 FAM204AQ9H8W3 233 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 MRPL47Q9HD33 250 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 VTA1Q9NP79 307 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 HOMER3Q9NSC5 361 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 GOLGA6AQ9NYA3 693 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 CNOT8Q9UFF9 292 aaKnown RBP10.29□□□□□ -0.76
CHKA-207ENST00000533728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHKA-207ENST00000533728 SCINQ9Y6U3 715 aa10.29□□□□□ -0.76
CHKA-207ENST00000533728 HMGB1P1B2RPK0 211 aaPredicted RBP10.28□□□□□ -0.76
CHKA-207ENST00000533728 ZBTB42B2RXF5 422 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 ABLIM1O14639 778 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 FSCN2O14926 492 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 PSTPIP1O43586 416 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 SPOPO43791 374 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 PRKCBP05771 671 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 HOXC6P09630 235 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 CDH5P33151 784 aaPredicted RBP10.28□□□□□ -0.76
CHKA-207ENST00000533728 NSFP46459 744 aaKnown RBP10.28□□□□□ -0.76
CHKA-207ENST00000533728 ACOT2P49753 483 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 EIF3BP55884 814 aaKnown RBP10.28□□□□□ -0.76
CHKA-207ENST00000533728 DR1Q01658 176 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 TAP1Q03518 808 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 LAMTOR4Q0VGL1 99 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 NCOA4Q13772 614 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 HLTFQ14527 1009 aaKnown RBP eCLIP10.28□□□□□ -0.765e-7■■□□□ 11.9
CHKA-207ENST00000533728 MESDQ14696 234 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 SGSM1Q2NKQ1 1148 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 MORN1Q5T089 497 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 DUPD1Q68J44 220 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 MPZL3Q6UWV2 235 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 LEKR1Q6ZMV7 388 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 RUFY4Q6ZNE9 571 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 MON1BQ7L1V2 547 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 DNAAF5Q86Y56 855 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 SLC13A5Q86YT5 568 aaPredicted RBP10.28□□□□□ -0.76
CHKA-207ENST00000533728 PRPF31Q8WWY3 499 aaKnown RBP10.28□□□□□ -0.76
CHKA-207ENST00000533728 IFT81Q8WYA0 676 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 GLG1Q92896 1179 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 ZIM3Q96PE6 472 aa10.28□□□□□ -0.76
CHKA-207ENST00000533728 AP1M1Q9BXS5 423 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms