RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 C7orf25Q9BPX7 421 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 RTP3Q9BQQ7 232 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 MTMR12Q9C0I1 747 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 MAGEF1Q9HAY2 307 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 SLC2A4RGQ9NR83 387 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 GDE1Q9NZC3 331 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 HSPBP1Q9NZL4 362 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 SERTAD1Q9UHV2 236 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 RCOR1Q9UKL0 485 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 MAFFQ9ULX9 164 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 WDFY4Q6ZS81 3184 aa11.26□□□□□ -0.61
CAPN1-225ENST00000533704 CACNA1IQ9P0X4 2223 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 OBSL1O75147 1896 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 NUP210Q8TEM1 1887 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-225ENST00000533704 KIF26AQ9ULI4 1882 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-225ENST00000533704 ZNF233A6NK53 670 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 NRG2O14511 850 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-225ENST00000533704 CLIC2O15247 247 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 EIF3DO15371 548 aaKnown RBP eCLIP11.25□□□□□ -0.61
CAPN1-225ENST00000533704 CYP11A1P05108 521 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 PNPLA4P41247 253 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 SNW1Q13573 536 aaKnown RBP11.25□□□□□ -0.61
CAPN1-225ENST00000533704 GRM2Q14416 872 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 TEAD2Q15562 447 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 MGAT5BQ3V5L5 792 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 FAM78AQ5JUQ0 283 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 TANGO2Q6ICL3 276 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 C1orf127Q8N9H9 656 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 RDH13Q8NBN7 331 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 ANKRD36BP1Q96IX9 119 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 ZSWIM3Q96MP5 696 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 PLA2G2FQ9BZM2 168 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 ZCWPW1Q9H0M4 648 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 SLC39A2Q9NP94 309 aa11.25□□□□□ -0.61
CAPN1-225ENST00000533704 AVENQ9NQS1 362 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-225ENST00000533704 ABI2Q9NYB9 513 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-225ENST00000533704 F5P12259 2224 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 A0A1B0GVL5 298 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 KIAA0391O15091 583 aaKnown RBP11.24□□□□□ -0.61
CAPN1-225ENST00000533704 HUS1O60921 280 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 ECI2O75521 394 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 CLSTN1O94985 981 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 TNNC2P02585 160 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 DCNP07585 359 aaKnown RBP11.24□□□□□ -0.61
CAPN1-225ENST00000533704 HOXD13P35453 343 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 NUBP1P53384 320 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 KRT85P78386 507 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 RBP5P82980 135 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 TSPY1Q01534 308 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 VEPH1Q14D04 833 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 MLF2Q15773 248 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-225ENST00000533704 TAF12Q16514 161 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 SCARA3Q6AZY7 606 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 POTEHQ6S545 545 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 EPM2AIP1Q7L775 607 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-225ENST00000533704 HS2ST1Q7LGA3 356 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 DCP1BQ8IZD4 617 aaKnown RBP11.24□□□□□ -0.61
CAPN1-225ENST00000533704 PDCL2Q8N4E4 241 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 DTWD2Q8NBA8 298 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 LEMD2Q8NC56 503 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 SHKBP1Q8TBC3 707 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 ZNF507Q8TCN5 953 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-225ENST00000533704 SCFD1Q8WVM8 642 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 CCDC127Q96BQ5 260 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 BORCS6Q96GS4 357 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 SHDQ96IW2 340 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 LPIN3Q9BQK8 851 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 IRF2BPLQ9H1B7 796 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 DNAJC25Q9H1X3 360 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 ZFP14Q9HCL3 533 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 AGPAT3Q9NRZ7 376 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 DDX43Q9NXZ2 648 aaKnown RBP11.24□□□□□ -0.61
CAPN1-225ENST00000533704 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 SNX9Q9Y5X1 595 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 MYH10P35580 1976 aa11.24□□□□□ -0.61
CAPN1-225ENST00000533704 MOSPD3O75425 235 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 SLFN14P0C7P3 912 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 DLATP10515 647 aaKnown RBP11.23□□□□□ -0.61
CAPN1-225ENST00000533704 PFKFB1P16118 471 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 TNNI1P19237 187 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 CD72P21854 359 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 ACAT1P24752 427 aaKnown RBP11.23□□□□□ -0.61
CAPN1-225ENST00000533704 VIPR2P41587 438 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 TUFMP49411 452 aaKnown RBP11.23□□□□□ -0.61
CAPN1-225ENST00000533704 EPHA5P54756 1037 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 MYL7Q01449 175 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 PFKPQ01813 784 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 UBXN2BQ14CS0 331 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 SURF1Q15526 300 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 SNRNP35Q16560 246 aaKnown RBP11.23□□□□□ -0.61
CAPN1-225ENST00000533704 SLC44A4Q53GD3 710 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 CNNM4Q6P4Q7 775 aa11.23□□□□□ -0.61
CAPN1-225ENST00000533704 DNAJB7Q7Z6W7 309 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-225ENST00000533704 ITIH5Q86UX2 942 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms