RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 SGSM1Q2NKQ1 1148 aa26.63■■□□□ 1.85
USP48-214ENST00000532737 ZNF699Q32M78 642 aa26.63■■□□□ 1.85
USP48-214ENST00000532737 SEMA4DQ92854 862 aa26.63■■□□□ 1.85
USP48-214ENST00000532737 PI4K2AQ9BTU6 479 aa26.63■■□□□ 1.85
USP48-214ENST00000532737 DNAJC25Q9H1X3 360 aa26.63■■□□□ 1.85
USP48-214ENST00000532737 THAP9Q9H5L6 903 aa26.63■■□□□ 1.85
USP48-214ENST00000532737 NXF1Q9UBU9 619 aaKnown RBP26.63■■□□□ 1.85
USP48-214ENST00000532737 POLIQ9UNA4 740 aa26.63■■□□□ 1.85
USP48-214ENST00000532737 OR6C75A6NL08 312 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 C1RP00736 705 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 ASS1P00966 412 aaKnown RBP26.62■■□□□ 1.85
USP48-214ENST00000532737 ROR1Q01973 937 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 SPOPLQ6IQ16 392 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 ANKRD54Q6NXT1 300 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 DPH6Q7L8W6 267 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 OSTM1Q86WC4 334 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 OR10T2Q8NGX3 314 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 ENOX1Q8TC92 643 aaKnown RBP26.62■■□□□ 1.85
USP48-214ENST00000532737 MSLNLQ96KJ4 702 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 MMS19Q96T76 1030 aa26.62■■□□□ 1.85
USP48-214ENST00000532737 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.62■■□□□ 1.852e-8■■■■■ 54.2
USP48-214ENST00000532737 SYCE3A1L190 88 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 LETM1O95202 739 aaPredicted RBP26.61■■□□□ 1.85
USP48-214ENST00000532737 OR4Q2P0C623 313 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 SRGAP2BP0DMP2 458 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 TNNC1P63316 161 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 ZNF667Q5HYK9 610 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 SYCE2Q6PIF2 218 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 CREBRFQ8IUR6 639 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 ADGRF2Q8IZF7 708 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 THEM5Q8N1Q8 247 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 TMEM86AQ8N2M4 240 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 KBTBD7Q8WVZ9 684 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 TAF4BQ92750 862 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 TMEM209Q96SK2 561 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 FUCA2Q9BTY2 467 aa26.61■■□□□ 1.85
USP48-214ENST00000532737 OXCT2Q9BYC2 517 aaPredicted RBP26.61■■□□□ 1.85
USP48-214ENST00000532737 SAMSN1Q9NSI8 373 aaKnown RBP26.61■■□□□ 1.85
USP48-214ENST00000532737 WDR27A2RRH5 827 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 FMO5P49326 533 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 CLUL1Q15846 466 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 C12orf76Q8N812 135 aaPredicted RBP26.6■■□□□ 1.85
USP48-214ENST00000532737 KREMEN2Q8NCW0 462 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 FBXL13Q8NEE6 735 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 MRPL45Q9BRJ2 306 aaKnown RBP26.6■■□□□ 1.85
USP48-214ENST00000532737 APOBEC3GQ9HC16 384 aaKnown RBP26.6■■□□□ 1.85
USP48-214ENST00000532737 MAN1C1Q9NR34 630 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 RAB20Q9NX57 234 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 FBXW11Q9UKB1 542 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 COQ4Q9Y3A0 265 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 NFE2L3Q9Y4A8 694 aa26.6■■□□□ 1.85
USP48-214ENST00000532737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.6■■□□□ 1.85
USP48-214ENST00000532737 GABRDO14764 452 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 ABLIM3O94929 683 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 CLSTN1O94985 981 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 KCNH2Q12809 1159 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 ANO6Q4KMQ2 910 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 HSP90AA4PQ58FG1 418 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 ZNF461Q8TAF7 563 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 SPATA18Q8TC71 538 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 SMYD3Q9H7B4 428 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 DZANK1Q9NVP4 752 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 DDX43Q9NXZ2 648 aaKnown RBP26.59■■□□□ 1.85
USP48-214ENST00000532737 RAPGEFL1Q9UHV5 662 aa26.59■■□□□ 1.85
USP48-214ENST00000532737 HCRTO43612 131 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 CPB1P15086 417 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 WARSP23381 471 aaKnown RBP26.58■■□□□ 1.85
USP48-214ENST00000532737 RNF19BQ6ZMZ0 732 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 HDAC7Q8WUI4 952 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 APOL5Q9BWW9 433 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 ZCWPW1Q9H0M4 648 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 SDCBP2Q9H190 292 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 S1PR5Q9H228 398 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 PLEKHA4Q9H4M7 779 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 CD207Q9UJ71 328 aa26.58■■□□□ 1.85
USP48-214ENST00000532737 TSC2P49815 1807 aa26.58■■□□□ 1.84
USP48-214ENST00000532737 PLXNA3P51805 1871 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 TACC1O75410 805 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 AFPP02771 609 aaKnown RBP26.57■■□□□ 1.84
USP48-214ENST00000532737 FAM163BP0C2L3 166 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 HOXB8P17481 243 aaPredicted RBP26.57■■□□□ 1.84
USP48-214ENST00000532737 ACAT1P24752 427 aaKnown RBP26.57■■□□□ 1.84
USP48-214ENST00000532737 LHX1P48742 406 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 CDH8P55286 799 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 NOP14P78316 857 aaKnown RBP26.57■■□□□ 1.84
USP48-214ENST00000532737 MYL7Q01449 175 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 GPR17Q13304 367 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 ZSCAN23Q3MJ62 389 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 LEXMQ3ZCV2 418 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 TPGS2Q68CL5 300 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 SCARA5Q6ZMJ2 495 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 LRRTM3Q86VH5 581 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 FAM114A1Q8IWE2 563 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.57■■□□□ 1.84
USP48-214ENST00000532737 FEZF2Q8TBJ5 459 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 IMPG2Q9BZV3 1241 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 NME7Q9Y5B8 376 aa26.57■■□□□ 1.84
USP48-214ENST00000532737 PMM2O15305 246 aa26.56■■□□□ 1.84
USP48-214ENST00000532737 VNN2O95498 520 aa26.56■■□□□ 1.84
USP48-214ENST00000532737 LMO2P25791 158 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms