RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 TSC2P49815 1807 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 TEX28O15482 410 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 LILRB3O75022 631 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 TACC1O75410 805 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 GLUD1P00367 558 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 ZNF18P17022 549 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 WARSP23381 471 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 IGFBP6P24592 240 aaPredicted RBP12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 OR1D2P34982 312 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 MRPL58Q14197 206 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 NCAPHQ15003 741 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 KRT31Q15323 416 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 SKIV2LQ15477 1246 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 DUSP6Q16828 381 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 EXOC3L4Q17RC7 722 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 SOWAHAQ2M3V2 549 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 SLC8B1Q6J4K2 584 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 DCP1BQ8IZD4 617 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 KLHL5Q96PQ7 755 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 PI4K2AQ9BTU6 479 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 IGFLR1Q9H665 355 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 CYP3A43Q9HB55 503 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 DZANK1Q9NVP4 752 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 TAB2Q9NYJ8 693 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 LIMA1Q9UHB6 759 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 FBXL5Q9UKA1 691 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 MAFFQ9ULX9 164 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 PCDHGC5Q9Y5F6 944 aa12.67□□□□□ -0.38
PPFIA1-220ENST00000532024 ELF1P32519 619 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 ARPP19P56211 112 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 SMARCB1Q12824 385 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 RAB33AQ14088 237 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 IQCB1Q15051 598 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 LIN9Q5TKA1 542 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 TPGS2Q68CL5 300 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 ADGRD2Q7Z7M1 963 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 LUZP1Q86V48 1076 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 EHBP1Q8NDI1 1231 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 OR6B3Q8NGW1 331 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 MAFAQ8NHW3 353 aaPredicted RBP12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 CASP10Q92851 521 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 TNIP3Q96KP6 325 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 ACBD6Q9BR61 282 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 INTS2Q9H0H0 1204 aaKnown RBP12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 VPS16Q9H269 839 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 PRRC2BQ5JSZ5 2229 aaKnown RBP12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 VWA8A3KMH1 1905 aa12.66□□□□□ -0.38
PPFIA1-220ENST00000532024 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 A8MXQ7 604 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 PER2O15055 1255 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 CLASP2O75122 1294 aaKnown RBP12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 SERPINC1P01008 464 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 TPM3P06753 285 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 RPL17P18621 184 aaKnown RBP12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 RFX1P22670 979 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 GNL1P36915 607 aaPredicted RBP12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 ASPAP45381 313 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 COPB1P53618 953 aaKnown RBP12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 ROR1Q01973 937 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 HYAL1Q12794 435 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 CUL2Q13617 745 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 CCDC85BQ15834 202 aaPredicted RBP12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 MIIPQ5JXC2 388 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 EP400NLQ6ZTU2 488 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 CCDC149Q6ZUS6 474 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 RTL10Q7L3V2 364 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 ENOSF1Q7L5Y1 443 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 LIMS2Q7Z4I7 341 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 UNC93AQ86WB7 457 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 PALB2Q86YC2 1186 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 PPM1KQ8N3J5 372 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 ZNF461Q8TAF7 563 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 C2orf15Q8WU43 125 aaKnown RBP12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 HDAC7Q8WUI4 952 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 PPM1EQ8WY54 764 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 SEMA4DQ92854 862 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 CLSTN3Q9BQT9 956 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 PLEKHA4Q9H4M7 779 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 SMYD3Q9H7B4 428 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■■■■■ 98.5
PPFIA1-220ENST00000532024 CDH9Q9ULB4 789 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 POLIQ9UNA4 740 aa12.65□□□□□ -0.38
PPFIA1-220ENST00000532024 ATG2AQ2TAZ0 1938 aa12.64□□□□□ -0.39
PPFIA1-220ENST00000532024 PRRG1O14668 218 aa12.64□□□□□ -0.39
PPFIA1-220ENST00000532024 GABRDO14764 452 aa12.64□□□□□ -0.39
PPFIA1-220ENST00000532024 TBC1D4O60343 1298 aa12.64□□□□□ -0.39
PPFIA1-220ENST00000532024 CLCN4P51793 760 aa12.64□□□□□ -0.39
PPFIA1-220ENST00000532024 GCNT1Q02742 428 aa12.64□□□□□ -0.39
PPFIA1-220ENST00000532024 LRMPQ12912 555 aa12.64□□□□□ -0.39
PPFIA1-220ENST00000532024 GPR17Q13304 367 aa12.64□□□□□ -0.39
PPFIA1-220ENST00000532024 LLGL2Q6P1M3 1020 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms