RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 GPD1P21695 349 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 EXOSC10Q01780 885 aaKnown RBP4.31□□□□□ -1.72
ATM-217ENST00000531957 TUBB3Q13509 450 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 PTPRRQ15256 657 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 NBPF8Q3BBV2 869 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 TAF2Q6P1X5 1199 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 C3orf20Q8ND61 904 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 PSD4Q8NDX1 1056 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 POC1BQ8TC44 478 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 SCAMP4Q969E2 229 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 TPSD1Q9BZJ3 242 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 SLC13A1Q9BZW2 595 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 MAN1C1Q9NR34 630 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 ADAM21Q9UKJ8 722 aa4.31□□□□□ -1.72
ATM-217ENST00000531957 CADPSQ9ULU8 1353 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 WDR27A2RRH5 827 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 CCDC151A5D8V7 595 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 MANSC4A6NHS7 340 aaPredicted RBP4.3□□□□□ -1.72
ATM-217ENST00000531957 ANXA1P04083 346 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 NR2F6P10588 404 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 PDCP20941 246 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 PRDX5P30044 214 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 PIK3CGP48736 1102 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 NDUFV1P49821 464 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 ITIH3Q06033 890 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 FOXF2Q12947 444 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 HABP2Q14520 560 aaPredicted RBP4.3□□□□□ -1.72
ATM-217ENST00000531957 CATIPQ7Z7H3 387 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 FAM90A1Q86YD7 464 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 PDSS2Q86YH6 399 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 RASAL3Q86YV0 1011 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 SRRM1Q8IYB3 904 aaKnown RBP4.3□□□□□ -1.72
ATM-217ENST00000531957 SH2D3CQ8N5H7 860 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 CAMKK1Q8N5S9 505 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 DDB2Q92466 427 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 TNPO1Q92973 898 aaKnown RBP4.3□□□□□ -1.72
ATM-217ENST00000531957 RGMAQ96B86 450 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 SARAFQ96BY9 339 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 TIMP4Q99727 224 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 SIDT1Q9NXL6 827 aaKnown RBP4.3□□□□□ -1.72
ATM-217ENST00000531957 ABCF2Q9UG63 623 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 COL4A3BPQ9Y5P4 624 aa4.3□□□□□ -1.72
ATM-217ENST00000531957 CGB1A6NKQ9 187 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 E7ENX8 843 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 PROP1O75360 226 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 AHSGP02765 367 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 FTLP02792 175 aaPredicted RBP4.29□□□□□ -1.72
ATM-217ENST00000531957 PDHA1P08559 390 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 ITPKBP27987 946 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 CYP2C19P33261 490 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 ABCG1P45844 678 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 TOB1P50616 345 aaPredicted RBP4.29□□□□□ -1.72
ATM-217ENST00000531957 TAP2Q03519 686 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 NOGQ13253 232 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 RBM20Q5T481 1227 aaKnown RBP4.29□□□□□ -1.72
ATM-217ENST00000531957 VPS53Q5VIR6 699 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 HEATR3Q7Z4Q2 680 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 PPP1R3BQ86XI6 285 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 HAPLN3Q96S86 360 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 ACTRT3Q9BYD9 372 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 TINAGL1Q9GZM7 467 aaPredicted RBP4.29□□□□□ -1.72
ATM-217ENST00000531957 PCDH12Q9NPG4 1184 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 KMT5AQ9NQR1 393 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 KLC4Q9NSK0 619 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 GNL3LQ9NVN8 582 aaKnown RBP4.29□□□□□ -1.72
ATM-217ENST00000531957 CFAP97Q9P2B7 532 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 DKK3Q9UBP4 350 aa4.29□□□□□ -1.72
ATM-217ENST00000531957 M0QYG6 137 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 TRIAP1O43715 76 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 URI1O94763 535 aaPredicted RBP4.28□□□□□ -1.72
ATM-217ENST00000531957 SNUPNO95149 360 aaKnown RBP4.28□□□□□ -1.72
ATM-217ENST00000531957 EBLN1P0CF75 366 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 RARBP10826 455 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 RECQLP46063 649 aaPredicted RBP4.28□□□□□ -1.72
ATM-217ENST00000531957 MAP2K6P52564 334 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 NXPH1P58417 271 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 SRSF4Q08170 494 aaKnown RBP4.28□□□□□ -1.72
ATM-217ENST00000531957 EIF2B5Q13144 721 aaKnown RBP4.28□□□□□ -1.72
ATM-217ENST00000531957 MAPK7Q13164 816 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 BOP1Q14137 746 aaKnown RBP4.28□□□□□ -1.72
ATM-217ENST00000531957 KIF22Q14807 665 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 SCARB1Q8WTV0 552 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 DPF1Q92782 380 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 RFKQ969G6 155 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 PBKQ96KB5 322 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 CNPPD1Q9BV87 410 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 GPR35Q9HC97 309 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 RLIMQ9NVW2 624 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 RNF7Q9UBF6 113 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 FEZ2Q9UHY8 353 aaPredicted RBP4.28□□□□□ -1.72
ATM-217ENST00000531957 POLHQ9Y253 713 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 PCDHA1Q9Y5I3 950 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 WNT6Q9Y6F9 365 aa4.28□□□□□ -1.72
ATM-217ENST00000531957 SETD1BQ9UPS6 1966 aaKnown RBP4.27□□□□□ -1.73
ATM-217ENST00000531957 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 WIPF3A6NGB9 483 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 DTNBO60941 627 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 IL33O95760 270 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 TTLL1O95922 423 aa4.27□□□□□ -1.73
ATM-217ENST00000531957 CHEK2O96017 543 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms