RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 TRMT2AQ8IZ69 625 aaKnown RBP4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 ARMC10Q8N2F6 343 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 ANKS4BQ8N8V4 417 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 OR7D4Q8NG98 312 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 CEP70Q8NHQ1 597 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 IGDCC4Q8TDY8 1250 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 ZNF480Q8WV37 535 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 WFDC12Q8WWY7 111 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 ATRIPQ8WXE1 791 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 DDX17Q92841 729 aaKnown RBP4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 RILPL2Q969X0 211 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 LRRC46Q96FV0 321 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 FEM1CQ96JP0 617 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 METTL22Q9BUU2 404 aaPredicted RBP4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 AMNQ9BXJ7 453 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 KCNF1Q9H3M0 494 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 MLXIPQ9HAP2 919 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 G6PC2Q9NQR9 355 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 LANCL2Q9NS86 450 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 TMEM140Q9NV12 185 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 USP21Q9UK80 565 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 ZHX1Q9UKY1 873 aaPredicted RBP4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 RRP7AQ9Y3A4 280 aaKnown RBP4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 DTNAQ9Y4J8 743 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 SNX8Q9Y5X2 465 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 HS3ST4Q9Y661 456 aa4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 MYBBP1AQ9BQG0 1328 aaKnown RBP4.85□□□□□ -1.63
AC055878.1-201ENST00000531858 PITPNM2Q9BZ72 1349 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 GTPBP10A4D1E9 387 aaKnown RBP4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 ZNF839A8K0R7 811 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 WASH4PA8MWX3 477 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 FCHO1O14526 889 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 CLGNO14967 610 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 SRGAP3O43295 1099 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 PTP4A3O75365 173 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 GNAI3P08754 354 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 NR2F1P10589 423 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 IL1R1P14778 569 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 DDCP20711 480 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 SLC5A2P31639 672 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 CRHR1P34998 444 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 PSMC2P35998 433 aaKnown RBP4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 CCR9P51686 369 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 SEC24CP53992 1094 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 PNLIPRP1P54315 467 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 PER3P56645 1201 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 GNAI1P63096 354 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 MVKQ03426 396 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 CHRNEQ04844 493 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 GRIN1Q05586 938 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 NSUN2Q08J23 767 aaKnown RBP eCLIP4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 MAMLD1Q13495 774 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 CUL4BQ13620 913 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 SCARB2Q14108 478 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 WTAPQ15007 396 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 STILQ15468 1287 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 TSTQ16762 297 aaKnown RBP4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 TRIM60Q495X7 471 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 TTC31Q49AM3 519 aaPredicted RBP4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 LRCH2Q5VUJ6 765 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 MRNIPQ6NTE8 343 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 KIAA0408Q6ZU52 694 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 Q6ZVL8 140 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 OR5AN1Q8NGI8 311 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 SMCR8Q8TEV9 937 aaPredicted RBP4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 CFHR4Q92496 578 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 KCNN1Q92952 543 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 TAF1DQ9H5J8 278 aaPredicted RBP4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 DIAPH3Q9NSV4 1193 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 DTLQ9NZJ0 730 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 CFAP97Q9P2B7 532 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 IMPACTQ9P2X3 320 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 FBLN5Q9UBX5 448 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 SCAF8Q9UPN6 1271 aaKnown RBP4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 TMEM5Q9Y2B1 443 aa4.84□□□□□ -1.63
AC055878.1-201ENST00000531858 A0A087WWL8 130 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 A0A0A6YYK5 440 aaPredicted RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 SAC3D1A6NKF1 404 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 EFCAB8A8MWE9 144 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 H0Y3Z8 333 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 CCP110O43303 1012 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 ADCY6O43306 1168 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 DHX16O60231 1041 aaKnown RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 GPR32O75388 356 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 MATN4O95460 622 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 NTSR2O95665 410 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 LY86O95711 162 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 TFRCP02786 760 aaKnown RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 AMY1AP04745 511 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 LAMP2P13473 410 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 PORP16435 677 aaPredicted RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 TAL1P17542 331 aaPredicted RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 HDCP19113 662 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 NOS3P29474 1203 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 HOXC13P31276 330 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 ATICP31939 592 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 GUCY1A2P33402 732 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 SREBF1P36956 1147 aa4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 ALDH18A1P54886 795 aaKnown RBP4.83□□□□□ -1.64
AC055878.1-201ENST00000531858 SCAPQ12770 1279 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms