RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CYB561D2O14569 222 aa18.18■□□□□ 0.5
CPSF1-207ENST00000531727 SOAT2O75908 522 aa18.18■□□□□ 0.5
CPSF1-207ENST00000531727 GCNT3O95395 438 aa18.18■□□□□ 0.5
CPSF1-207ENST00000531727 FZD5Q13467 585 aa18.18■□□□□ 0.5
CPSF1-207ENST00000531727 SLC39A12Q504Y0 691 aa18.18■□□□□ 0.5
CPSF1-207ENST00000531727 DNAJB7Q7Z6W7 309 aaPredicted RBP18.18■□□□□ 0.5
CPSF1-207ENST00000531727 FAM213AQ9BRX8 229 aa18.18■□□□□ 0.5
CPSF1-207ENST00000531727 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
CPSF1-207ENST00000531727 FRMD3A2A2Y4 597 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 HEPACAM2A8MVW5 462 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 ZNF263O14978 683 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 FGF19O95750 216 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 IDEP14735 1019 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 TUFMP49411 452 aaKnown RBP18.17■□□□□ 0.5
CPSF1-207ENST00000531727 CASP5P51878 434 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 ALCAMQ13740 583 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 SV2CQ496J9 727 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 GAREM2Q75VX8 874 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 ITIH5Q86UX2 942 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 BRSK2Q8IWQ3 736 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 THEM5Q8N1Q8 247 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 BORCS6Q96GS4 357 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 ZNF560Q96MR9 790 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 BACH2Q9BYV9 841 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 PANK2Q9BZ23 570 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
CPSF1-207ENST00000531727 NUP210Q8TEM1 1887 aaPredicted RBP18.17■□□□□ 0.5
CPSF1-207ENST00000531727 KPNA7A9QM74 516 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 K7ELQ4 463 aaPredicted RBP18.16■□□□□ 0.5
CPSF1-207ENST00000531727 STX6O43752 255 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 LDHAP00338 332 aaKnown RBP18.16■□□□□ 0.5
CPSF1-207ENST00000531727 GARTP22102 1010 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 NASPP49321 788 aaPredicted RBP18.16■□□□□ 0.5
CPSF1-207ENST00000531727 WNT7BP56706 349 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 CSTF1Q05048 431 aaKnown RBP18.16■□□□□ 0.5
CPSF1-207ENST00000531727 SMARCB1Q12824 385 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 STXBP5Q5T5C0 1151 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 WSCD1Q658N2 575 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 ZNF687Q8N1G0 1237 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 C2orf15Q8WU43 125 aaKnown RBP18.16■□□□□ 0.5
CPSF1-207ENST00000531727 RSPRY1Q96DX4 576 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 SAAL1Q96ER3 474 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 SEPT5Q99719 369 aaPredicted RBP18.16■□□□□ 0.5
CPSF1-207ENST00000531727 MKNK1Q9BUB5 465 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 FGFBP2Q9BYJ0 223 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 PANK4Q9NVE7 773 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 NDRG2Q9UN36 371 aaKnown RBP18.16■□□□□ 0.5
CPSF1-207ENST00000531727 PIAS3Q9Y6X2 628 aa18.16■□□□□ 0.5
CPSF1-207ENST00000531727 ARNTLO00327 626 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 KINO60870 393 aaKnown RBP18.15■□□□□ 0.5
CPSF1-207ENST00000531727 GABRR2P28476 465 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 PNPLA4P41247 253 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 TFAMQ00059 246 aaKnown RBP18.15■□□□□ 0.5
CPSF1-207ENST00000531727 FCHO2Q0JRZ9 810 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 VEPH1Q14D04 833 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 MGAT5BQ3V5L5 792 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 YAF2Q8IY57 180 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 SYCP3Q8IZU3 236 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 ZSWIM2Q8NEG5 633 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 FAM200AQ8TCP9 573 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 SPPL2BQ8TCT7 592 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 LPIN3Q9BQK8 851 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 ATXN3LQ9H3M9 355 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 RBAKQ9NYW8 714 aaPredicted RBP18.15■□□□□ 0.5
CPSF1-207ENST00000531727 PCDHGA2Q9Y5H1 932 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 CACNA1IQ9P0X4 2223 aa18.15■□□□□ 0.5
CPSF1-207ENST00000531727 CHADO15335 359 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 ATF6P18850 670 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 MLLT6P55198 1093 aaPredicted RBP18.14■□□□□ 0.49
CPSF1-207ENST00000531727 STK38Q15208 465 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 ARHGAP15Q53QZ3 475 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 GPR158Q5T848 1215 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 LRRTM3Q86VH5 581 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 ARID3BQ8IVW6 561 aaPredicted RBP18.14■□□□□ 0.49
CPSF1-207ENST00000531727 CCDC65Q8IXS2 484 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 DCP1BQ8IZD4 617 aaKnown RBP18.14■□□□□ 0.49
CPSF1-207ENST00000531727 PDILTQ8N807 584 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 LINC00301Q8NCQ3 95 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 FAM3CQ92520 227 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 CBWD1Q9BRT8 395 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 CHRDQ9H2X0 955 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 TMEM206Q9H813 350 aa18.14■□□□□ 0.49
CPSF1-207ENST00000531727 PRMT8Q9NR22 394 aaPredicted RBP18.14■□□□□ 0.49
CPSF1-207ENST00000531727 EXTL3O43909 919 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 ITGB3P05106 788 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 HAPLN1P10915 354 aaPredicted RBP18.13■□□□□ 0.49
CPSF1-207ENST00000531727 CDC25CP30307 473 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 POLR2BP30876 1174 aaKnown RBP18.13■□□□□ 0.49
CPSF1-207ENST00000531727 CDR1P51861 262 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 MTAPQ13126 283 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 GPIHBP1Q8IV16 184 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 LRRC52Q8N7C0 313 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 C1orf127Q8N9H9 656 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 SUMF1Q8NBK3 374 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 CSGALNACT1Q8TDX6 532 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 CACTINQ8WUQ7 758 aaKnown RBP18.13■□□□□ 0.49
CPSF1-207ENST00000531727 NELL1Q92832 810 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 MSANTD3Q96H12 275 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 IER2Q9BTL4 223 aa18.13■□□□□ 0.49
CPSF1-207ENST00000531727 TNMDQ9H2S6 317 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms