RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PLAC9Q5JTB6 97 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 AWAT2Q6E213 333 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 KRTAP5-11Q6L8G4 156 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 CEP85Q6P2H3 762 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 AOPEPQ8N6M6 819 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 POC1BQ8TC44 478 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 SPRTNQ9H040 489 aaPredicted RBP6.06□□□□□ -1.44
PTPRK-220ENST00000531466 SMOC2Q9H3U7 446 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 SERTAD4Q9NUC0 356 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 ELOVL5Q9NYP7 299 aa6.06□□□□□ -1.44
PTPRK-220ENST00000531466 PPEF2O14830 753 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 TRIAP1O43715 76 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 TOP3BO95985 862 aaKnown RBP6.05□□□□□ -1.44
PTPRK-220ENST00000531466 JUPP14923 745 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 NDUFB7P17568 137 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 ERVK-21P61565 698 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 BMPR2Q13873 1038 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 KLHL22Q53GT1 634 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 PRAMEF17Q5VTA0 474 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 GADL1Q6ZQY3 521 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 ZNF551Q7Z340 670 aaPredicted RBP6.05□□□□□ -1.44
PTPRK-220ENST00000531466 CHAC2Q8WUX2 184 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 REPS1Q96D71 796 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 AMBRA1Q9C0C7 1298 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 ANLNQ9NQW6 1124 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 SAP30BPQ9UHR5 308 aaKnown RBP6.05□□□□□ -1.44
PTPRK-220ENST00000531466 PCDHB1Q9Y5F3 818 aa6.05□□□□□ -1.44
PTPRK-220ENST00000531466 WASHC2AQ641Q2 1341 aa6.04□□□□□ -1.44
PTPRK-220ENST00000531466 JTBO76095 146 aa6.04□□□□□ -1.44
PTPRK-220ENST00000531466 FOXG1P55316 489 aaPredicted RBP6.04□□□□□ -1.44
PTPRK-220ENST00000531466 CLUL1Q15846 466 aa6.04□□□□□ -1.44
PTPRK-220ENST00000531466 ZNF517Q6ZMY9 492 aaPredicted RBP6.04□□□□□ -1.44
PTPRK-220ENST00000531466 AMOTL1Q8IY63 956 aa6.04□□□□□ -1.44
PTPRK-220ENST00000531466 SSH1Q8WYL5 1049 aa6.04□□□□□ -1.44
PTPRK-220ENST00000531466 SPATA31A3Q5VYP0 1347 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 EYA4O95677 639 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 LPOP22079 712 aaPredicted RBP6.03□□□□□ -1.44
PTPRK-220ENST00000531466 SFPQP23246 707 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTPRK-220ENST00000531466 RBM20Q5T481 1227 aaKnown RBP6.03□□□□□ -1.44
PTPRK-220ENST00000531466 RUSC1-AS1Q66K80 236 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 SLC29A4Q7RTT9 530 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 FANCBQ8NB91 859 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 HDAC10Q969S8 669 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 OSBPL9Q96SU4 736 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 ARHGEF3Q9NR81 526 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 TUBD1Q9UJT1 453 aa6.03□□□□□ -1.44
PTPRK-220ENST00000531466 KCNU1A8MYU2 1149 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 ZNF213O14771 459 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 GPR39O43194 453 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 PDHA1P08559 390 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 FAM163BP0C2L3 166 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 CHRM3P20309 590 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 PSMC1P62191 440 aaKnown RBP6.02□□□□□ -1.45
PTPRK-220ENST00000531466 TLE1Q04724 770 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 IL10RAQ13651 578 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 RAB39AQ14964 217 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 TAF2Q6P1X5 1199 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 PSD4Q8NDX1 1056 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 KLHDC4Q8TBB5 520 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 CLPTM1LQ96KA5 538 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 MRGPRX4Q96LA9 322 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 CAMKK2Q96RR4 588 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 MRPS18AQ9NVS2 196 aaKnown RBP6.02□□□□□ -1.45
PTPRK-220ENST00000531466 ETAA1Q9NY74 926 aa6.02□□□□□ -1.45
PTPRK-220ENST00000531466 CNTNAP2Q9UHC6 1331 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 PRRT4C9JH25 899 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 SGTAO43765 313 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 ANXA1P04083 346 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 TUBB4AP04350 444 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 CBSLP0DN79 551 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 CBSP35520 551 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 ARHGAP25P42331 645 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 MMP13P45452 471 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 POLGP54098 1239 aaPredicted RBP6.01□□□□□ -1.45
PTPRK-220ENST00000531466 RABEP1Q15276 862 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 ZNF260Q3ZCT1 412 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 SPATS2Q86XZ4 545 aaKnown RBP6.01□□□□□ -1.45
PTPRK-220ENST00000531466 VPS16Q9H269 839 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 ZNF580Q9UK33 172 aa6.01□□□□□ -1.45
PTPRK-220ENST00000531466 ZNF785A8K8V0 405 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 NDUFS2O75306 463 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 NXPH3O95157 252 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 TKTP29401 623 aaKnown RBP6□□□□□ -1.45
PTPRK-220ENST00000531466 CD6P30203 668 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 CCKBRP32239 447 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 KLF1Q13351 362 aaPredicted RBP6□□□□□ -1.45
PTPRK-220ENST00000531466 VPS53Q5VIR6 699 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 CNGA4Q8IV77 575 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 WDR66Q8TBY9 1149 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 ATRIPQ8WXE1 791 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 TBC1D5Q92609 795 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 KAT5Q92993 513 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 SCAMP4Q969E2 229 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 FAM136AQ96C01 138 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 SERHLQ9NQF3 203 aa6□□□□□ -1.45
PTPRK-220ENST00000531466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6□□□□□ -1.45
PTPRK-220ENST00000531466 SMIM35A0A1B0GVV1 85 aa5.99□□□□□ -1.45
PTPRK-220ENST00000531466 H0YIZ8 118 aa5.99□□□□□ -1.45
PTPRK-220ENST00000531466 VPS4BO75351 444 aa5.99□□□□□ -1.45
PTPRK-220ENST00000531466 ITGALP20701 1170 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms