RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 KARSQ15046 597 aaKnown RBP19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 TXNDC11Q6PKC3 985 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 MAMSTRQ6ZN01 415 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 PSMG2Q969U7 264 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 E2F7Q96AV8 911 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 FIZ1Q96SL8 496 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 LPIN3Q9BQK8 851 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 IER2Q9BTL4 223 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 ATXN3LQ9H3M9 355 aa19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 TPRP12270 2363 aaKnown RBP19.97■□□□□ 0.79
SSSCA1-206ENST00000531405 DMWDQ09019 674 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 PPP2R5DQ14738 602 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 TMEM132DQ14C87 1099 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 SLC39A12Q504Y0 691 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 ZC2HC1CQ53FD0 456 aaPredicted RBP19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 GPR158Q5T848 1215 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 ARMCX5Q6P1M9 558 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 Q6ZS52 159 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 GPR161Q8N6U8 529 aaKnown RBP19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 RAD54LQ92698 747 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 TSPAN18Q96SJ8 248 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 SEPT5Q99719 369 aaPredicted RBP19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 IKZF4Q9H2S9 585 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 GTSE1Q9NYZ3 720 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 GMEB2Q9UKD1 530 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 ASB3Q9Y575 518 aa19.96■□□□□ 0.79
SSSCA1-206ENST00000531405 ANO9A1A5B4 782 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 PIRO00625 290 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 SLC26A4O43511 780 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 PRAMEF12O95522 483 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 CXCL12P48061 93 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 ATXN1P54253 815 aaKnown RBP19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 CYP4F8P98187 520 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 SPEM2Q0P670 501 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 PRR23BQ6ZRT6 265 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 CD302Q8IX05 232 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 RASSF8Q8NHQ8 419 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 FAM200AQ8TCP9 573 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 C2orf42Q9NWW7 574 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 RAB23Q9ULC3 237 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 LAMA1P25391 3075 aa19.95■□□□□ 0.78
SSSCA1-206ENST00000531405 EPG5Q9HCE0 2579 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 MYO16Q9Y6X6 1858 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 GREB1Q4ZG55 1949 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 ANAPC1Q9H1A4 1944 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 CHURC1-FNTBB4DL54 471 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 SPECC1L-ADORA2AF8WAN1 911 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 DPYSL4O14531 572 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 TBCAO75347 108 aaKnown RBP19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 CYP11A1P05108 521 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 ATF6P18850 670 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 HOXC13P31276 330 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 FNTBP49356 437 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 MLLT6P55198 1093 aaPredicted RBP19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 GTF2BQ00403 316 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 LMNB2Q03252 620 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 SRSF5Q13243 272 aaKnown RBP19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 LRRC32Q14392 662 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 MGAT5BQ3V5L5 792 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 ZCWPW1Q9H0M4 648 aa19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 SMG9Q9H0W8 520 aaKnown RBP19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 C8orf33Q9H7E9 229 aaPredicted RBP19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 CDV3Q9UKY7 258 aaKnown RBP19.94■□□□□ 0.78
SSSCA1-206ENST00000531405 MYBPHLA2RUH7 354 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 SCP2P22307 547 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 CTHP32929 405 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 TNK2Q07912 1038 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 PON2Q15165 354 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 ARHGAP15Q53QZ3 475 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 ADALQ6DHV7 355 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 ITIH5Q86UX2 942 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 SPEM1Q8N4L4 309 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 CELF5Q8N6W0 485 aaKnown RBP19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 GIPC2Q8TF65 315 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 MSANTD3Q96H12 275 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 PYM1Q9BRP8 204 aaKnown RBP19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 IL21Q9HBE4 155 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 SMC3Q9UQE7 1217 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 DERAQ9Y315 318 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 CACNA1BQ00975 2339 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 ACACBO00763 2458 aa19.93■□□□□ 0.78
SSSCA1-206ENST00000531405 PRR5-ARHGAP8B1AHC4 643 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 CYB561D2O14569 222 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 HRO43593 1189 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 FGF19O95750 216 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 LONP1P36776 959 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 ARHGAP8P85298 464 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 ARHGAP29Q52LW3 1261 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 LARP1BQ659C4 914 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 HEATR6Q6AI08 1181 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 LAIR1Q6GTX8 287 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 LRRTM3Q86VH5 581 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 RALGPS2Q86X27 583 aaPredicted RBP19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 LARP4BQ92615 738 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 DPP3Q9NY33 737 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 HSFX1Q9UBD0 423 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 AGO2Q9UKV8 859 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 KIAA1549LQ6ZVL6 1849 aa19.92■□□□□ 0.78
SSSCA1-206ENST00000531405 DCDC2BA2VCK2 349 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms