RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 WSCD1Q658N2 575 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 MFSD6LQ8IWD5 586 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 CCDC65Q8IXS2 484 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 YAF2Q8IY57 180 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 EFCAB13Q8IY85 973 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 CACTINQ8WUQ7 758 aaKnown RBP24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 PSMG2Q969U7 264 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 SAAL1Q96ER3 474 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 ZNF396Q96N95 335 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 SEPT5Q99719 369 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 LRRC27Q9C0I9 530 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 TMEM206Q9H813 350 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 ZNF334Q9HCZ1 680 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 DOCK6Q96HP0 2047 aa24.05■■□□□ 1.44
TRAPPC4-210ENST00000531290 A0A087X0B3 334 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 FRMD3A2A2Y4 597 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 HEPACAM2A8MVW5 462 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 SOAT2O75908 522 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 PNPLA4P41247 253 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 CASP5P51878 434 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 SMARCB1Q12824 385 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 VEPH1Q14D04 833 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 TTC9BQ8N6N2 239 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 LINC00301Q8NCQ3 95 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 NOC3LQ8WTT2 800 aaKnown RBP24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 CLDN23Q96B33 292 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 ZNF560Q96MR9 790 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 ATXN3LQ9H3M9 355 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 TRPV5Q9NQA5 729 aa24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 RBAKQ9NYW8 714 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 TFIP11Q9UBB9 837 aaKnown RBP24.04■■□□□ 1.44
TRAPPC4-210ENST00000531290 SPTLC2O15270 562 aa24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 TAF12Q16514 161 aa24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 ARHGAP15Q53QZ3 475 aa24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 STXBP4Q6ZWJ1 553 aa24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 BRSK2Q8IWQ3 736 aa24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 DCP1BQ8IZD4 617 aaKnown RBP24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 MAML2Q8IZL2 1156 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 C2orf15Q8WU43 125 aaKnown RBP24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 BORCS6Q96GS4 357 aa24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 FBXO4Q9UKT5 387 aa24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 NDRG2Q9UN36 371 aaKnown RBP24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 AGAP1Q9UPQ3 857 aa24.03■■□□□ 1.44
TRAPPC4-210ENST00000531290 DMDP11532 3685 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 GOLGA8IPA6NC78 632 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 GOLGA8JA6NMD2 632 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 EXTL3O43909 919 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 PPP6R2O75170 966 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 PRPF6O94906 941 aaKnown RBP24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 HSP90AA1P07900 732 aaKnown RBP24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 GABRR2P28476 465 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 RPS9P46781 194 aaKnown RBP24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 CDR1P51861 262 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 CSTF1Q05048 431 aaKnown RBP24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 ZNF528Q3MIS6 628 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 HSCBQ8IWL3 235 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 SPPL2BQ8TCT7 592 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 PCIF1Q9H4Z3 704 aa24.02■■□□□ 1.44
TRAPPC4-210ENST00000531290 MYH11P35749 1972 aa24.02■■□□□ 1.43
TRAPPC4-210ENST00000531290 NOTCH4Q99466 2003 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 DPYSL4O14531 572 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 ITGB3P05106 788 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 POLR2BP30876 1174 aaKnown RBP24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 AMPD3Q01432 767 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 GPR158Q5T848 1215 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 GAREM2Q75VX8 874 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 ARID3BQ8IVW6 561 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 CSGALNACT2Q8N6G5 542 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 ZSWIM2Q8NEG5 633 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 CSGALNACT1Q8TDX6 532 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 FAM3CQ92520 227 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 SNX21Q969T3 373 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 GCNAQ96QF7 691 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 CBWD1Q9BRT8 395 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 TNMDQ9H2S6 317 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 CUEDC2Q9H467 287 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 PIAS3Q9Y6X2 628 aa24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 PTPRZ1P23471 2315 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC4-210ENST00000531290 TSPY1Q01534 308 aa24■■□□□ 1.43
TRAPPC4-210ENST00000531290 STXBP5Q5T5C0 1151 aa24■■□□□ 1.43
TRAPPC4-210ENST00000531290 LRRTM3Q86VH5 581 aa24■■□□□ 1.43
TRAPPC4-210ENST00000531290 GPIHBP1Q8IV16 184 aa24■■□□□ 1.43
TRAPPC4-210ENST00000531290 LPIN3Q9BQK8 851 aa24■■□□□ 1.43
TRAPPC4-210ENST00000531290 FGFBP2Q9BYJ0 223 aa24■■□□□ 1.43
TRAPPC4-210ENST00000531290 ABI2Q9NYB9 513 aaPredicted RBP24■■□□□ 1.43
TRAPPC4-210ENST00000531290 R3HCC1Q9Y3T6 440 aaKnown RBP24■■□□□ 1.43
TRAPPC4-210ENST00000531290 VPS13AQ96RL7 3174 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 KIAA0391O15091 583 aaKnown RBP23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 KINO60870 393 aaKnown RBP23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 HUS1O60921 280 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 CDC25CP30307 473 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 WNT7BP56706 349 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 GPD1LQ8N335 351 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 LRRC52Q8N7C0 313 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 C1orf127Q8N9H9 656 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 IQUBQ8NA54 791 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 GIPC2Q8TF65 315 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 ITGA11Q9UKX5 1188 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 PCDHB5Q9Y5E4 795 aa23.99■■□□□ 1.43
TRAPPC4-210ENST00000531290 CFAP54Q96N23 3096 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms