RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 VDRP11473 427 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 COMTP21964 271 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 TNNC1P63316 161 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
SRPRA-205ENST00000531104 C2orf54Q08AI8 447 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 MAMLD1Q13495 774 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 CNGA2Q16280 664 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 ZNF394Q53GI3 561 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 CCDC181Q5TID7 509 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 LIN9Q5TKA1 542 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 DCAF12L1Q5VU92 463 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 WDR93Q6P2C0 686 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 DENND1BQ6P3S1 775 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 TRAF7Q6Q0C0 670 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 MTERF4Q7Z6M4 381 aaKnown RBP11.61□□□□□ -0.55
SRPRA-205ENST00000531104 PASD1Q8IV76 773 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 USP38Q8NB14 1042 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 PPP1R10Q96QC0 940 aaKnown RBP11.61□□□□□ -0.55
SRPRA-205ENST00000531104 PNKPQ96T60 521 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 SELENOOQ9BVL4 669 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 OSBPL7Q9BZF2 842 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 WNT8AQ9H1J5 351 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 CARD9Q9H257 536 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 PDCL3Q9H2J4 239 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 HMX1Q9NP08 348 aaPredicted RBP11.61□□□□□ -0.55
SRPRA-205ENST00000531104 FAM105AQ9NUU6 356 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 SMARCAL1Q9NZC9 954 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 ADAM22Q9P0K1 906 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 PARP2Q9UGN5 583 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 HMGXB4Q9UGU5 601 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 CHORDC1Q9UHD1 332 aaPredicted RBP11.61□□□□□ -0.55
SRPRA-205ENST00000531104 PHF24Q9UPV7 400 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
SRPRA-205ENST00000531104 FAM170AA1A519 330 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 O00370 1275 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 TLR3O15455 904 aaKnown RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 CALB1P05937 261 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 GRK4P32298 578 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 CTNNA1P35221 906 aaKnown RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 THPOP40225 353 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 PNPLA4P41247 253 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 CLCN6P51797 869 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 NDST1P52848 882 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 SOX4Q06945 474 aaPredicted RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 LPIN1Q14693 890 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 MESDQ14696 234 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 BRD3Q15059 726 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 PPP1R15BQ5SWA1 713 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 TWF2Q6IBS0 349 aaKnown RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 MMS22LQ6ZRQ5 1243 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 UNC93AQ86WB7 457 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 PDCL2Q8N4E4 241 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 C1orf131Q8NDD1 294 aaKnown RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 GSTCDQ8NEC7 633 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 HNRNPLLQ8WVV9 542 aaKnown RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 RUBCNQ92622 972 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 ALG3Q92685 438 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 BTBD6Q96KE9 485 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.6□□□□□ -0.551e-7■□□□□ 9.7
SRPRA-205ENST00000531104 C11orf70Q9BRQ4 267 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 MRPL47Q9HD33 250 aaKnown RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 RBM12Q9NTZ6 932 aaKnown RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 KLK14Q9P0G3 267 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 CYTH4Q9UIA0 394 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 GIT1Q9Y2X7 761 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 NME7Q9Y5B8 376 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 PCDHA3Q9Y5H8 950 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
SRPRA-205ENST00000531104 SCINQ9Y6U3 715 aa11.6□□□□□ -0.55
SRPRA-205ENST00000531104 A0A1W2PQ45 241 aaPredicted RBP11.59□□□□□ -0.55
SRPRA-205ENST00000531104 A0A1W2PQY0 241 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 CCDC66A2RUB6 948 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 CCDC151A5D8V7 595 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 BHMG1C9JSJ3 638 aaPredicted RBP11.59□□□□□ -0.55
SRPRA-205ENST00000531104 PGRMC1O00264 195 aaKnown RBP11.59□□□□□ -0.55
SRPRA-205ENST00000531104 CEP104O60308 925 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 MGEA5O60502 916 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 PROSCO94903 275 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 CLSTN1O94985 981 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 CTSHP09668 335 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 RHOXF2BP0C7M4 288 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 ATF7P17544 494 aaPredicted RBP11.59□□□□□ -0.55
SRPRA-205ENST00000531104 YY1P25490 414 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 MAN1A1P33908 653 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 SLC1A1P43005 524 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 GABRB2P47870 512 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 HTRA3P83110 453 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 STILQ15468 1287 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 SOWAHAQ2M3V2 549 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 PKDCCQ504Y2 493 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 GLE1Q53GS7 698 aaKnown RBP11.59□□□□□ -0.55
SRPRA-205ENST00000531104 GLRA4Q5JXX5 417 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 LLGL2Q6P1M3 1020 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 LCLAT1Q6UWP7 414 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 CPNE8Q86YQ8 564 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 FEZF2Q8TBJ5 459 aa11.59□□□□□ -0.55
SRPRA-205ENST00000531104 KRT35Q92764 455 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms