RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-221ENST00000531068 HUS1O60921 280 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 TNNC2P02585 160 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 TMEM191BP0C7N4 346 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 BMP6P22004 513 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 EHHADHQ08426 723 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 TWF1Q12792 350 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 DPYDQ12882 1025 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 MYO1EQ12965 1108 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 DUSP4Q13115 394 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 ASTLQ6HA08 431 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-221ENST00000531068 CENPPQ6IPU0 288 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 DCP1BQ8IZD4 617 aaKnown RBP11.83□□□□□ -0.52
CAPN1-221ENST00000531068 TMEM130Q8N3G9 435 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 GLIS3Q8NEA6 775 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 C2orf15Q8WU43 125 aaKnown RBP11.83□□□□□ -0.52
CAPN1-221ENST00000531068 CCDC47Q96A33 483 aaKnown RBP11.83□□□□□ -0.52
CAPN1-221ENST00000531068 CCDC34Q96HJ3 373 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 GPR88Q9GZN0 384 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 SMOC2Q9H3U7 446 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 SLC39A2Q9NP94 309 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 ASAH2Q9NR71 780 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 SLC2A4RGQ9NR83 387 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 AGPAT3Q9NRZ7 376 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 EXOC1Q9NV70 894 aa11.83□□□□□ -0.52
CAPN1-221ENST00000531068 STK25O00506 426 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 KIF20AO95235 890 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 FGF19O95750 216 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 ITGB3P05106 788 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 KRT19P08727 400 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 OR4Q2P0C623 313 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 RFX1P22670 979 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 POLR2BP30876 1174 aaKnown RBP11.82□□□□□ -0.52
CAPN1-221ENST00000531068 HOXD13P35453 343 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 PTPN5P54829 565 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 PFKPQ01813 784 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 TYRO3Q06418 890 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 PNOCQ13519 176 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 CUL4BQ13620 913 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 KNOP1Q1ED39 458 aaKnown RBP11.82□□□□□ -0.52
CAPN1-221ENST00000531068 BMT2Q1RMZ1 405 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 WSCD1Q658N2 575 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 PARM1Q6UWI2 310 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 NPAS3Q8IXF0 933 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 NELFCDQ8IXH7 590 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 GRAMD1CQ8IYS0 662 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 SIX5Q8N196 739 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 TMEM86AQ8N2M4 240 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 C1orf127Q8N9H9 656 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 XXYLT1Q8NBI6 393 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 ATAD1Q8NBU5 361 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 ZSWIM2Q8NEG5 633 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 SPATA18Q8TC71 538 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 SCFD1Q8WVM8 642 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 ERCC4Q92889 916 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-221ENST00000531068 MCRS1Q96EZ8 462 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 BORCS6Q96GS4 357 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 PGLYRP2Q96PD5 576 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 FNBP1Q96RU3 617 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 RTP3Q9BQQ7 232 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 ZCWPW1Q9H0M4 648 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 INTS13Q9NVM9 706 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 GDAP2Q9NXN4 497 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 PCDHA5Q9Y5H7 936 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 C5orf42Q9H799 3197 aa11.82□□□□□ -0.52
CAPN1-221ENST00000531068 MTMR11A4FU01 709 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 TGFB1I1O43294 461 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 NARSO43776 548 aaKnown RBP11.81□□□□□ -0.52
CAPN1-221ENST00000531068 KLRC4O43908 158 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 ECI2O75521 394 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 PDGFBP01127 241 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-221ENST00000531068 CFHP08603 1231 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 CCDC192P0DO97 292 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 CASP1P29466 404 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 EPHA5P54756 1037 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 TSPY1Q01534 308 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 VEPH1Q14D04 833 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
CAPN1-221ENST00000531068 SLC39A12Q504Y0 691 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 IER5LQ5T953 404 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 DPH6Q7L8W6 267 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 ITIH5Q86UX2 942 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 ZSCAN30Q86W11 494 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 CBWD2Q8IUF1 395 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 WDR49Q8IV35 697 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 C12orf56Q8IXR9 622 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 FLCNQ8NFG4 579 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 SPPL2BQ8TCT7 592 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 ING5Q8WYH8 240 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 FGF14Q92915 247 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 SHDQ96IW2 340 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 ACBD6Q9BR61 282 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 CEP72Q9P209 647 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 YIPF1Q9Y548 306 aa11.81□□□□□ -0.52
CAPN1-221ENST00000531068 CLIC2O15247 247 aa11.8□□□□□ -0.52
CAPN1-221ENST00000531068 EXOC3O60645 756 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms