RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CASP10Q92851 521 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 HLA-CQ95604 372 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 FAXDC2Q96IV6 333 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 BPIFA3Q9BQP9 254 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 FUCA2Q9BTY2 467 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 RAB20Q9NX57 234 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 NFE2L3Q9Y4A8 694 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 CACNA1GO43497 2377 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 CHD7Q9P2D1 2997 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 REV3LO60673 3130 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 CAVIN2O95810 425 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 GLUD1P00367 558 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 ASS1P00966 412 aaKnown RBP16.4■□□□□ 0.22
CCS-206ENST00000530961 RPL17P18621 184 aaKnown RBP16.4■□□□□ 0.22
CCS-206ENST00000530961 OR1D2P34982 312 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 GTF2F1P35269 517 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCS-206ENST00000530961 FMO5P49326 533 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 CLCN4P51793 760 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 MYL5Q02045 173 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 SOWAHAQ2M3V2 549 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 ANO6Q4KMQ2 910 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 ERMP1Q7Z2K6 904 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 SLC22A17Q8WUG5 538 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 HDAC7Q8WUI4 952 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 MMS19Q96T76 1030 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 CLDND1Q9NY35 253 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 FBXL5Q9UKA1 691 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 L1RE1Q9UN81 338 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 HCFC2Q9Y5Z7 792 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 CDY1Q9Y6F8 540 aa16.4■□□□□ 0.22
CCS-206ENST00000530961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.39■□□□□ 0.21
CCS-206ENST00000530961 GABRDO14764 452 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 TACC1O75410 805 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 AFPP02771 609 aaKnown RBP16.39■□□□□ 0.21
CCS-206ENST00000530961 EEF1GP26641 437 aaKnown RBP16.39■□□□□ 0.21
CCS-206ENST00000530961 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
CCS-206ENST00000530961 KCNH2Q12809 1159 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 CBWD6Q4V339 395 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 WDR44Q5JSH3 913 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 CBWD3Q5JTY5 395 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 CBWD5Q5RIA9 395 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 LILRA6Q6PI73 481 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 RSPO2Q6UXX9 243 aaPredicted RBP16.39■□□□□ 0.21
CCS-206ENST00000530961 RTL10Q7L3V2 364 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 ADGRF2Q8IZF7 708 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 ZNF461Q8TAF7 563 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 PHOX2BQ99453 314 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 PLEKHA4Q9H4M7 779 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 CD320Q9NPF0 282 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 SAMSN1Q9NSI8 373 aaKnown RBP16.39■□□□□ 0.21
CCS-206ENST00000530961 NXF1Q9UBU9 619 aaKnown RBP16.39■□□□□ 0.21
CCS-206ENST00000530961 MAFFQ9ULX9 164 aa16.39■□□□□ 0.21
CCS-206ENST00000530961 SPTBN4Q9H254 2564 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 SMTNL1A8MU46 457 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 ADAM12O43184 909 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 TGM5O43548 720 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 CLSTN1O94985 981 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 HOXB8P17481 243 aaPredicted RBP16.38■□□□□ 0.21
CCS-206ENST00000530961 WARSP23381 471 aaKnown RBP16.38■□□□□ 0.21
CCS-206ENST00000530961 PCSK1P29120 753 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 ZNF165P49910 485 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 NOP14P78316 857 aaKnown RBP16.38■□□□□ 0.21
CCS-206ENST00000530961 MYL7Q01449 175 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 TCP11X2Q5H9J9 407 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 TPGS2Q68CL5 300 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 PALB2Q86YC2 1186 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 GJD3Q8N144 294 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 VN1R2Q8NFZ6 395 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
CCS-206ENST00000530961 DZANK1Q9NVP4 752 aa16.38■□□□□ 0.21
CCS-206ENST00000530961 KCNJ18B7U540 433 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 LINC01565O15544 149 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 ABLIM3O94929 683 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 TSPY1Q01534 308 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 ROR1Q01973 937 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 SMARCB1Q12824 385 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 GPR17Q13304 367 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 KCNJ12Q14500 433 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 MAN2A1Q16706 1144 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 CDKAL1Q5VV42 579 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 LLGL2Q6P1M3 1020 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 EP400NLQ6ZTU2 488 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 GLYCTKQ8IVS8 523 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 KREMEN2Q8NCW0 462 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 SEMA4DQ92854 862 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 TUBGCP2Q9BSJ2 902 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 PI4K2AQ9BTU6 479 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 CYP3A43Q9HB55 503 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 FANCLQ9NW38 375 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 DDX43Q9NXZ2 648 aaKnown RBP16.37■□□□□ 0.21
CCS-206ENST00000530961 CACNA1BQ00975 2339 aa16.37■□□□□ 0.21
CCS-206ENST00000530961 GLP2RO95838 553 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 CPB1P15086 417 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 ATF2P15336 505 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 EPCAMP16422 314 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 GNL1P36915 607 aaPredicted RBP16.36■□□□□ 0.21
CCS-206ENST00000530961 LTBRP36941 435 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms