RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 POLR2BP30876 1174 aaKnown RBP18.21■□□□□ 0.51
BRCA2-204ENST00000530893 SLCO1A2P46721 670 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 ATF7IP2Q5U623 682 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 GPAT2Q6NUI2 795 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 EEPD1Q7L9B9 569 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 POLNQ7Z5Q5 900 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 EXOC3L1Q86VI1 746 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 PACS2Q86VP3 889 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 ERO1BQ86YB8 467 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 SULF1Q8IWU6 871 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 CCDC77Q9BR77 488 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 NFKBIZQ9BYH8 718 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 SMARCAD1Q9H4L7 1026 aa18.21■□□□□ 0.51
BRCA2-204ENST00000530893 ADARB2Q9NS39 739 aaKnown RBP18.21■□□□□ 0.51
BRCA2-204ENST00000530893 DRG1Q9Y295 367 aaKnown RBP18.21■□□□□ 0.51
BRCA2-204ENST00000530893 MED7O43513 233 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 LIASO43766 372 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 ASPAP45381 313 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 TRIP13Q15645 432 aaPredicted RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 LONRF1Q17RB8 773 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 RNF187Q5TA31 235 aaPredicted RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 IZUMO3Q5VZ72 239 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 HIBCHQ6NVY1 386 aaPredicted RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 GSTA5Q7RTV2 222 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 ERICH1Q86X53 443 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 FAM212AQ96EL1 285 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 MCEEQ96PE7 176 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 XYLT2Q9H1B5 865 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 LHX5Q9H2C1 402 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 AGTPBP1Q9UPW5 1226 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 DNAJC25-GNG10A0A024R161 153 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 HBP1O60381 514 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 KRT1P04264 644 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 ABHD2P08910 425 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 BRD2P25440 801 aaKnown RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 MARK3P27448 753 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 SSTR3P32745 418 aaPredicted RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 TFAMQ00059 246 aaKnown RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 ZNF252P-AS1Q0IIN9 211 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 STAT4Q14765 748 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 RHPN2Q8IUC4 686 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 DHX37Q8IY37 1157 aaKnown RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 LRRC71Q8N4P6 559 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 ZCCHC9Q8N567 271 aaKnown RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 ANKS4BQ8N8V4 417 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 ARHGEF2Q92974 986 aaKnown RBP18.2■□□□□ 0.5
BRCA2-204ENST00000530893 FGD4Q96M96 766 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 SPATA33Q96N06 139 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 NINJ2Q9NZG7 142 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 TNFSF13BQ9Y275 285 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 EFR3BQ9Y2G0 817 aa18.2■□□□□ 0.5
BRCA2-204ENST00000530893 GJC1P36383 396 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 POU5F1BQ06416 359 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 ACTN3Q08043 901 aaPredicted RBP18.19■□□□□ 0.5
BRCA2-204ENST00000530893 KCTD2Q14681 263 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 CNGA2Q16280 664 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 KYNUQ16719 465 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 TFDP3Q5H9I0 405 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 CCDC62Q6P9F0 684 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 TAX1BP1Q86VP1 789 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 RIBC1Q8N443 379 aaPredicted RBP18.19■□□□□ 0.5
BRCA2-204ENST00000530893 NSRP1Q9H0G5 558 aaKnown RBP18.19■□□□□ 0.5
BRCA2-204ENST00000530893 LGALS13Q9UHV8 139 aa18.19■□□□□ 0.5
BRCA2-204ENST00000530893 CDH16O75309 829 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 GSCP56915 257 aaPredicted RBP18.18■□□□□ 0.5
BRCA2-204ENST00000530893 LACTBP83111 547 aaPredicted RBP18.18■□□□□ 0.5
BRCA2-204ENST00000530893 ITIH4Q14624 930 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 SPOCD1Q6ZMY3 1216 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 ANKS1BQ7Z6G8 1248 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 PIGWQ7Z7B1 504 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 TRIM50Q86XT4 487 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 ANKRD13AQ8IZ07 590 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 WDTC1Q8N5D0 677 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 CCDC197Q8NCU1 140 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 FNIP1Q8TF40 1166 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 FRMD8P1Q9BZ68 369 aaPredicted RBP18.18■□□□□ 0.5
BRCA2-204ENST00000530893 KCNH4Q9UQ05 1017 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 ACTL7BQ9Y614 415 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 CAPN7Q9Y6W3 813 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 IVNS1ABPQ9Y6Y0 642 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 ANK1P16157 1881 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 GOLGA6L7A0A1B0GV03 622 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 SPDYE5A6NIY4 337 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 H0YHG0 523 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 GJB6O95452 261 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 WEE2P0C1S8 567 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 LACTB2Q53H82 288 aaPredicted RBP18.18■□□□□ 0.5
BRCA2-204ENST00000530893 ZFYVE27Q5T4F4 411 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 SCARA3Q6AZY7 606 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 MFSD7Q6UXD7 560 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 CNPY4Q8N129 248 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 ALLCQ8N6M5 410 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 NKD2Q969F2 451 aaPredicted RBP18.18■□□□□ 0.5
BRCA2-204ENST00000530893 OTUD5Q96G74 571 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 TTC25Q96NG3 672 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 PRMT1Q99873 361 aaKnown RBP18.18■□□□□ 0.5
BRCA2-204ENST00000530893 BCO2Q9BYV7 579 aa18.18■□□□□ 0.5
BRCA2-204ENST00000530893 MROH8Q9H579 483 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms