RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 HEYLQ9NQ87 328 aaPredicted RBP7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 XPR1Q9UBH6 696 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 SCAF8Q9UPN6 1271 aaKnown RBP7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 AGAP1Q9UPQ3 857 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 M0QYG6 137 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 KCNQ3O43525 872 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 PIM1P11309 404 aaPredicted RBP7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 IDEP14735 1019 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 ACVR2AP27037 513 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 CLRN1P58418 232 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 G3BP1Q13283 466 aaKnown RBP eCLIP7.48□□□□□ -1.211e-7■■□□□ 11.7
CAPRIN1-208ENST00000530008 NFYCQ13952 458 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 CNGB1Q14028 1251 aaPredicted RBP7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 AMOTQ4VCS5 1084 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 SULT6B1Q6IMI4 303 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 ZDHHC24Q6UX98 284 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 RSRC2Q7L4I2 434 aaKnown RBP7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 ADGRE4PQ86SQ3 457 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 MOGAT3Q86VF5 341 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 CFHR4Q92496 578 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 RABGGTAQ92696 567 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 NELL2Q99435 816 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 CNPPD1Q9BV87 410 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 GSTO2Q9H4Y5 243 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 USP40Q9NVE5 1235 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 FBXO34Q9NWN3 711 aa7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
CAPRIN1-208ENST00000530008 RAB27BO00194 218 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 INMTO95050 263 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 CHEK2O96017 543 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 POMCP01189 267 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 DLG4P78352 724 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 SLC29A2Q14542 456 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 FBXO47Q5MNV8 452 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 ANKS6Q68DC2 871 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 USP17L6PQ6QN14 398 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 KIAA0408Q6ZU52 694 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 RAPGEF4Q8WZA2 1011 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 SPATA5L1Q9BVQ7 753 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 VPS45Q9NRW7 570 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 FAM30AQ9NZY2 134 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 NTMQ9P121 344 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 ZDHHC9Q9Y397 364 aa7.47□□□□□ -1.21
CAPRIN1-208ENST00000530008 CARMIL2Q6F5E8 1435 aa7.46□□□□□ -1.21
CAPRIN1-208ENST00000530008 UBE2QL1A1L167 161 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 B5MCH6 92 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 ASNA1O43681 348 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 AGFG2O95081 481 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 CKMT1AP12532 417 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 UBXN2BQ14CS0 331 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 MAPKAPK3Q16644 382 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 RETSATQ6NUM9 610 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 CRTC1Q6UUV9 634 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 COLGALT2Q8IYK4 626 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 TXNDC5Q8NBS9 432 aaKnown RBP7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 SLC17A8Q8NDX2 589 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 FAM46DQ8NEK8 389 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 TMIEQ8NEW7 156 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 DNERQ8NFT8 737 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 SPPL3Q8TCT6 385 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 OTUD7AQ8TE49 926 aaPredicted RBP7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 RUBCNQ92622 972 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 SIGLEC10Q96LC7 697 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 SEC62Q99442 399 aaKnown RBP7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 PRPF18Q99633 342 aaKnown RBP7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 SIK2Q9H0K1 926 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 FAM53CQ9NYF3 392 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 GGA3Q9NZ52 723 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 IFT80Q9P2H3 777 aaPredicted RBP7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 SRP68Q9UHB9 627 aaKnown RBP7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 TBC1D30Q9Y2I9 924 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 NR2E1Q9Y466 385 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 IRAK3Q9Y616 596 aa7.46□□□□□ -1.22
CAPRIN1-208ENST00000530008 A0A0B4J269 797 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 CDHR4A6H8M9 788 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 HOXA3O43365 443 aaPredicted RBP7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 LDHCP07864 332 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 EGR1P18146 543 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 CNTFP26441 200 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 WNT3P56703 355 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 BMT2Q1RMZ1 405 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 RNF151Q2KHN1 245 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 FAM214AQ32MH5 1076 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 ZMYM1Q5SVZ6 1142 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 TMTC4Q5T4D3 741 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 FAM160B1Q5W0V3 765 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 MCTP2Q6DN12 878 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 RALYLQ86SE5 291 aaKnown RBP7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 LRRTM4Q86VH4 590 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 GATAD2AQ86YP4 633 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 SLC30A5Q8TAD4 765 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 ASB12Q8WXK4 309 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 PPP1R9BQ96SB3 815 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 PCDHAC1Q9H158 963 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 EPC1Q9H2F5 836 aa7.45□□□□□ -1.22
CAPRIN1-208ENST00000530008 DHX36Q9H2U1 1008 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms