RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
SF3B2-208ENST00000529994 ITPRIPL2Q3MIP1 535 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 CENPPQ6IPU0 288 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 DNAJB7Q7Z6W7 309 aaPredicted RBP12.32□□□□□ -0.44
SF3B2-208ENST00000529994 USP37Q86T82 979 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 DAW1Q8N136 415 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 SYNPOQ8N3V7 929 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 BPIFB1Q8TDL5 484 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 SNX29Q8TEQ0 813 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 TMEM209Q96SK2 561 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 KMT5AQ9NQR1 393 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 DDX19AQ9NUU7 478 aaKnown RBP12.32□□□□□ -0.44
SF3B2-208ENST00000529994 SLC8A2Q9UPR5 921 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 ABCA7Q8IZY2 2146 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 NUP205Q92621 2012 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 MTMR11A4FU01 709 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 SFI1A8K8P3 1242 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 PP2D1A8MPX8 630 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 E9PMD0 336 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 M0QZQ0 153 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 DCLK1O15075 740 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 SLC16A4O15374 487 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
SF3B2-208ENST00000529994 CXCL8P10145 99 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 NOVA1P51513 510 aaKnown RBP12.31□□□□□ -0.44
SF3B2-208ENST00000529994 FOXC1Q12948 553 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 GPR17Q13304 367 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 PLK5Q496M5 336 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 ARHGAP15Q53QZ3 475 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 HAUS3Q68CZ6 603 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 TRIM68Q6AZZ1 485 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 FSTL4Q6MZW2 842 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 UNQ6494/PRO21346Q6UXR6 183 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 PSMG2Q969U7 264 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 HHIPQ96QV1 700 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 LPIN3Q9BQK8 851 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 GKN1Q9NS71 199 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 ARHGAP28Q9P2N2 729 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 LRWD1Q9UFC0 647 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
SF3B2-208ENST00000529994 AKAP13Q12802 2813 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 DENND4CQ5VZ89 1909 aa12.31□□□□□ -0.44
SF3B2-208ENST00000529994 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 OTOL1A6NHN0 477 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 C4orf47A7E2U8 309 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 RNF40O75150 1001 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 EGFP01133 1207 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 MATR3P43243 847 aaKnown RBP eCLIP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 CREB5Q02930 508 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 RAD51AP2Q09MP3 1159 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 GRSF1Q12849 480 aaKnown RBP eCLIP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 NOLC1Q14978 699 aaKnown RBP eCLIP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 LARP1BQ659C4 914 aaKnown RBP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 OVOS1Q6IE37 1185 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 CHFRQ96EP1 664 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 SEPT5Q99719 369 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 EDEM2Q9BV94 578 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 RUSC1Q9BVN2 902 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 BACH2Q9BYV9 841 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 DUSP15Q9H1R2 295 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 EBF3Q9H4W6 596 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 TASP1Q9H6P5 420 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 HPS4Q9NQG7 708 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 VPS45Q9NRW7 570 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 THG1LQ9NWX6 298 aaKnown RBP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 OBP2AQ9NY56 170 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 PCDHGA5Q9Y5G8 931 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 THADAQ6YHU6 1953 aa12.3□□□□□ -0.44
SF3B2-208ENST00000529994 FASNP49327 2511 aaKnown RBP12.3□□□□□ -0.44
SF3B2-208ENST00000529994 CCDC163A0A0D9SF12 145 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 OR6C75A6NL08 312 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 PPEF2O14830 753 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 MUTP22033 750 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 CDC25AP30304 524 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.443e-13■■□□□ 11.9
SF3B2-208ENST00000529994 ZNF252P-AS1Q0IIN9 211 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 MAPK7Q13164 816 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 NAIF1Q69YI7 327 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-208ENST00000529994 ITIH5Q86UX2 942 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 GIPC2Q8TF65 315 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 ZC3H10Q96K80 434 aaKnown RBP12.29□□□□□ -0.44
SF3B2-208ENST00000529994 PLIN2Q99541 437 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 SLC46A2Q9BY10 475 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 RAB34Q9BZG1 259 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 FBRSL1Q9HCM7 1045 aaKnown RBP12.29□□□□□ -0.44
SF3B2-208ENST00000529994 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.29□□□□□ -0.44
SF3B2-208ENST00000529994 CCL26Q9Y258 94 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 INVSQ9Y283 1065 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
SF3B2-208ENST00000529994 ASB3Q9Y575 518 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
SF3B2-208ENST00000529994 MYO16Q9Y6X6 1858 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms