RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 C6orf10Q5SRN2 563 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 MDM1Q8TC05 714 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 ERP27Q96DN0 273 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 L3MBTL3Q96JM7 780 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-220ENST00000529526 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
CTNND1-220ENST00000529526 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTNND1-220ENST00000529526 PKP3Q9Y446 797 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 PCDHB2Q9Y5E7 798 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 CPS1P31327 1500 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 ARHGAP10A1A4S6 786 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF197O14709 1029 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 CYP2C9P11712 490 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 COILP38432 576 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-220ENST00000529526 SGO1Q5FBB7 561 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 MROH9Q5TGP6 573 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 IFNEQ86WN2 208 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 B4GALNT2Q8NHY0 566 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 SCFD1Q8WVM8 642 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 BHMTQ93088 406 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 ZFYVE19Q96K21 471 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 YIPF2Q9BWQ6 316 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 APOL5Q9BWW9 433 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 SHCBP1LQ9BZQ2 653 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 FBXO28Q9NVF7 368 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 CDYLQ9Y232 598 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 V9GYQ6 96 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 CAMSAP1Q5T5Y3 1602 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 SETBP1Q9Y6X0 1596 aa8.5□□□□□ -1.05
CTNND1-220ENST00000529526 KBTBD13C9JR72 458 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 PSMD3O43242 534 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 CDH16O75309 829 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 HIST1H2AGP0C0S8 130 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 HIST1H2ADP20671 130 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 CSE1LP55060 971 aaKnown RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 RPS6P62753 249 aaKnown RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 GTF2H3Q13889 308 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 CNGA3Q16281 694 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 RRM2BQ7LG56 351 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 HIST1H2AHQ96KK5 128 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 PARK7Q99497 189 aaKnown RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 HIST1H2AJQ99878 128 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 H2AFJQ9BTM1 129 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 THTPAQ9BU02 230 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 NIF3L1Q9GZT8 377 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 LATS2Q9NRM7 1088 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 C2CD2LO14523 706 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 MED24O75448 989 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 RAP1GAPP47736 663 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 CPA2P48052 419 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 LRRC74AQ0VAA2 488 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 CHI3L2Q15782 390 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 CYGBQ8WWM9 190 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 ZMAT2Q96NC0 199 aaKnown RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 LSM7Q9UK45 103 aaKnown RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF263O14978 683 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 SRP72O76094 671 aaKnown RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 DPEP1P16444 411 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 TAL1P17542 331 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 SEC24CP53992 1094 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 DMC1Q14565 340 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 INPP5AQ14642 412 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 PKN3Q6P5Z2 889 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 LAYNQ6UX15 382 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 GALNT4Q8N4A0 578 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 TSPAN17Q96FV3 270 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 MRPL1Q9BYD6 325 aaKnown RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 SYNDIG1Q9H7V2 258 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 AGPAT3Q9NRZ7 376 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 ERAP1Q9NZ08 941 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 PAK5Q9P286 719 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 MAGEB2O15479 319 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 ALDH1A1P00352 501 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 PLA2G4AP47712 749 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 ERVK-24P63145 666 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 VPS72Q15906 364 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 AGBL2Q5U5Z8 902 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 DENND5BQ6ZUT9 1274 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 PRPF39Q86UA1 669 aaKnown RBP8.49□□□□□ -1.05
CTNND1-220ENST00000529526 TPCN2Q8NHX9 752 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 RIT2Q99578 217 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 DEFB129Q9H1M3 183 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 VIPAS39Q9H9C1 493 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 NAGPAQ9UK23 515 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 GPR75-ASB3A0A0A6YYF3 556 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 POLBP06746 335 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 PON1P27169 355 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 SERPINB9P50453 376 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 SLC29A2Q14542 456 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 DGKDQ16760 1214 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 ZRANB3Q5FWF4 1079 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 SHCBP1Q8NEM2 672 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 CASKIN2Q8WXE0 1202 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 ATG4AQ8WYN0 398 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 ISCUQ9H1K1 167 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 RSAD1Q9HA92 442 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 DPP3Q9NY33 737 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 SLC30A1Q9Y6M5 507 aa8.49□□□□□ -1.05
CTNND1-220ENST00000529526 CCL15-CCL14A0A0B4J2E2 113 aa8.48□□□□□ -1.05
CTNND1-220ENST00000529526 SLC26A4O43511 780 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms