RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 PAX3P23760 479 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 CCNE1P24864 410 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 ADSSP30520 456 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 MAGEA9P43362 315 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 TUFMP49411 452 aaKnown RBP14.04□□□□□ -0.16
CPSF1-204ENST00000529288 CYP4F8P98187 520 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 L1TD1Q5T7N2 865 aaKnown RBP14.04□□□□□ -0.16
CPSF1-204ENST00000529288 CRELD2Q6UXH1 353 aaPredicted RBP14.04□□□□□ -0.16
CPSF1-204ENST00000529288 ARID3BQ8IVW6 561 aaPredicted RBP14.04□□□□□ -0.16
CPSF1-204ENST00000529288 EFCAB13Q8IY85 973 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 CLDN23Q96B33 292 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 HVCN1Q96D96 273 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 RSPRY1Q96DX4 576 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 GCNAQ96QF7 691 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 USP28Q96RU2 1077 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 LRRC3Q9BY71 257 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 ZCWPW1Q9H0M4 648 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 PCIF1Q9H4Z3 704 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 ABI2Q9NYB9 513 aaPredicted RBP14.04□□□□□ -0.16
CPSF1-204ENST00000529288 FBXO4Q9UKT5 387 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 PCDHB13Q9Y5F0 798 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 STYXL1Q9Y6J8 313 aa14.04□□□□□ -0.16
CPSF1-204ENST00000529288 KPNA7A9QM74 516 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 CYP11A1P05108 521 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 KRT19P08727 400 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 MTAPQ13126 283 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 STK38Q15208 465 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 SV2CQ496J9 727 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 FOXD4L5Q5VV16 416 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-204ENST00000529288 ZSWIM2Q8NEG5 633 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-204ENST00000529288 PSMG2Q969U7 264 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 E2F7Q96AV8 911 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 DNAJC19Q96DA6 116 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 ZFYVE19Q96K21 471 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 BACH2Q9BYV9 841 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 RBAKQ9NYW8 714 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-204ENST00000529288 NCDNQ9UBB6 729 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 SEL1LQ9UBV2 794 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 AGAP1Q9UPQ3 857 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 MTMR6Q9Y217 621 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 NCANO14594 1321 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 MYH15Q9Y2K3 1946 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 NOTCH4Q99466 2003 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 DMDP11532 3685 aa14.03□□□□□ -0.16
CPSF1-204ENST00000529288 CITO14578 2027 aa14.02□□□□□ -0.16
CPSF1-204ENST00000529288 SHISA7A6NL88 538 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 SLC38A8A6NNN8 435 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 PRPF6O94906 941 aaKnown RBP14.02□□□□□ -0.17
CPSF1-204ENST00000529288 FGF19O95750 216 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 ITGB3P05106 788 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 POLR2BP30876 1174 aaKnown RBP14.02□□□□□ -0.17
CPSF1-204ENST00000529288 RPS9P46781 194 aaKnown RBP14.02□□□□□ -0.17
CPSF1-204ENST00000529288 SOX9P48436 509 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 CASP5P51878 434 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 WNT7BP56706 349 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 BFSP1Q12934 665 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 FZD5Q13467 585 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 ZNF528Q3MIS6 628 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 GAREM2Q75VX8 874 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 LRRTM3Q86VH5 581 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 DCP1BQ8IZD4 617 aaKnown RBP14.02□□□□□ -0.17
CPSF1-204ENST00000529288 CSGALNACT2Q8N6G5 542 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 CACTINQ8WUQ7 758 aaKnown RBP14.02□□□□□ -0.17
CPSF1-204ENST00000529288 RUBCNQ92622 972 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 FAM84AQ96KN4 292 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 ZNF560Q96MR9 790 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 FGFBP2Q9BYJ0 223 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 SMG9Q9H0W8 520 aaKnown RBP14.02□□□□□ -0.17
CPSF1-204ENST00000529288 TRPV4Q9HBA0 871 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 ZSCAN32Q9NX65 697 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 TFIP11Q9UBB9 837 aaKnown RBP14.02□□□□□ -0.17
CPSF1-204ENST00000529288 R3HCC1Q9Y3T6 440 aaKnown RBP14.02□□□□□ -0.17
CPSF1-204ENST00000529288 CFAP54Q96N23 3096 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 VPS13AQ96RL7 3174 aa14.02□□□□□ -0.17
CPSF1-204ENST00000529288 A0A087X0B3 334 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 CHADO15335 359 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 STX6O43752 255 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 PRPF40AO75400 957 aaKnown RBP14.01□□□□□ -0.17
CPSF1-204ENST00000529288 PPP1R37O75864 691 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 HAPLN1P10915 354 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-204ENST00000529288 ATF6P18850 670 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 TSPY1Q01534 308 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 SLC39A14Q15043 492 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 FOXD4L6Q3SYB3 417 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-204ENST00000529288 FOXD4L3Q6VB84 417 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-204ENST00000529288 CCDC65Q8IXS2 484 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 STKLD1Q8NE28 680 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 TTC16Q8NEE8 873 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 BORCS6Q96GS4 357 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 CBWD1Q9BRT8 395 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 PI4K2AQ9BTU6 479 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 STRA6Q9BX79 667 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 ZSCAN16Q9H4T2 348 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-204ENST00000529288 MAGED2Q9UNF1 606 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-204ENST00000529288 PCDHB5Q9Y5E4 795 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 PCDHGA2Q9Y5H1 932 aa14.01□□□□□ -0.17
CPSF1-204ENST00000529288 MYH11P35749 1972 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms