RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-208	ENST00000528906	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.94	□□□□□ -0.18
PSMD13-208	ENST00000528906	ADAM28	Q9UKQ2	775 aa		13.94	□□□□□ -0.18
PSMD13-208	ENST00000528906	PCDHB8	Q9UN66	801 aa		13.94	□□□□□ -0.18
PSMD13-208	ENST00000528906	L1RE1	Q9UN81	338 aa		13.94	□□□□□ -0.18
PSMD13-208	ENST00000528906	GABRD	O14764	452 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	TNFAIP3	P21580	790 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	GNA15	P30679	374 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	MAGEA10	P43363	369 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	RAP1GAP	P47736	663 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	NDST1	P52848	882 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	RAD23B	P54727	409 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	CDR2	Q01850	454 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	BMS1	Q14692	1282 aa	Known RBP	13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	STIL	Q15468	1287 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	WSCD1	Q658N2	575 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	SLC47A2	Q86VL8	602 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	CRYBG2	Q8N1P7	616 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	THEM5	Q8N1Q8	247 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	FIBCD1	Q8N539	461 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	WHAMM	Q8TF30	809 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	RABGGTA	Q92696	567 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	TNIP3	Q96KP6	325 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	ZNF558	Q96NG5	402 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	AGPAT1	Q99943	283 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	CACNG4	Q9UBN1	327 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	STK39	Q9UEW8	545 aa		13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
PSMD13-208	ENST00000528906	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	3e-6	■■■■■ 93.1
PSMD13-208	ENST00000528906	CIT	O14578	2027 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	SOWAHD	A6NJG2	315 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906		A8MXQ7	604 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	MED7	O43513	233 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	VDR	P11473	427 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	PCSK1	P29120	753 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	PPM1A	P35813	382 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	BRCC3	P46736	316 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	KRT83	P78385	493 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	SPA17	Q15506	151 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	ASTE1	Q2TB18	679 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	KCNT2	Q6UVM3	1135 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	TRIM72	Q6ZMU5	477 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	SLC4A11	Q8NBS3	891 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	EPS8L1	Q8TE68	723 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	KBTBD7	Q8WVZ9	684 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	HEXIM2	Q96MH2	286 aa	Known RBP	13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	ELOVL4	Q9GZR5	314 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	PDCL3	Q9H2J4	239 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	LUC7L	Q9NQ29	371 aa	Known RBP	13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	PUF60	Q9UHX1	559 aa	Known RBP	13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	NOCT	Q9UK39	431 aa	Known RBP	13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	STXBP5L	Q9Y2K9	1186 aa		13.92	□□□□□ -0.18
PSMD13-208	ENST00000528906	EIF3CL	B5ME19	914 aa	Known RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	THAP12	O43422	761 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	TLL1	O43897	1013 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	NDUFA10	O95299	355 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	PLEK	P08567	350 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	CD19	P15391	556 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	IGFBP6	P24592	240 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	KIF11	P52732	1056 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	CNGA2	Q16280	664 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	SLC18A3	Q16572	532 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	ZNF394	Q53GI3	561 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	SGO2	Q562F6	1265 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	C10orf76	Q5T2E6	689 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	PPP1R2P3	Q6NXS1	205 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	RAD9B	Q6WBX8	426 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	NOP9	Q86U38	636 aa	Known RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	TXLNB	Q8N3L3	684 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	SP7	Q8TDD2	431 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	ZNF606	Q8WXB4	792 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	IGSF21	Q96ID5	467 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	RNPC3	Q96LT9	517 aa	Known RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	EIF3C	Q99613	913 aa	Known RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	ACBD6	Q9BR61	282 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	SYT11	Q9BT88	431 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	MARCH5	Q9NX47	278 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	DDX43	Q9NXZ2	648 aa	Known RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	SPG21	Q9NZD8	308 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	ADAMTS1	Q9UHI8	967 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	PCDHB12	Q9Y5F1	795 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	MRPL42	Q9Y6G3	142 aa	Known RBP	13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	SCN5A	Q14524	2016 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906	RALGAPA2	Q2PPJ7	1873 aa		13.91	□□□□□ -0.18
PSMD13-208	ENST00000528906		I3L4J1	428 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	CCP110	O43303	1012 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	CAPN15	O75808	1086 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	OAZ2	O95190	189 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	LCA5L	O95447	670 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	ITGB1	P05556	798 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	PDGFRB	P09619	1106 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	GZMA	P12544	262 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	FGFR3	P22607	806 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	YWHAH	Q04917	246 aa	Predicted RBP	13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	FAM171A1	Q5VUB5	890 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	OVOS1	Q6IE37	1185 aa		13.9	□□□□□ -0.18
PSMD13-208	ENST00000528906	FUT10	Q6P4F1	479 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms