RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 DRC7Q8IY82 874 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RNF168Q8IYW5 571 aaPredicted RBP13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SPC24Q8NBT2 197 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SHC3Q92529 594 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TMEM169Q96HH4 297 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 STK33Q9BYT3 514 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 EDEM3Q9BZQ6 932 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SLC28A3Q9HAS3 691 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RRAGDQ9NQL2 400 aaPredicted RBP13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CISHQ9NSE2 258 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MTMR10Q9NXD2 777 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MTUS1Q9ULD2 1270 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CAPN11Q9UMQ6 739 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PCDHB8Q9UN66 801 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 A0A0C4DFX4 3053 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 COL4A4P53420 1690 aaPredicted RBP13□□□□□ -0.33
TRAF3IP2-211ENST00000528599 A0A1W2PQJ5 194 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CARNS1A5YM72 827 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FOXN3O00409 490 aaPredicted RBP12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 HCRTO43612 131 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TACC1O75410 805 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CYP11A1P05108 521 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ODC1P11926 461 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FGFR3P22607 806 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GOLGA8FQ08AF8 430 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GOLGA8DPQ0D2H9 430 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ELAVL2Q12926 359 aaKnown RBP12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CACNA2D4Q7Z3S7 1137 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PPFIBP1Q86W92 1011 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ADGRF2Q8IZF7 708 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 WHAMMQ8TF30 809 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 JAKMIP2Q96AA8 810 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FAM81BQ96LP2 452 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 HMGXB4Q9UGU5 601 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DAAM1Q9Y4D1 1078 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 F8VZ95 297 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GABRDO14764 452 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FAM163BP0C2L3 166 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TYMPP19971 482 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 WARSP23381 471 aaKnown RBP12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ERVK-21P61565 698 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PLCB3Q01970 1234 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 INCA1Q0VD86 236 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TRIM14Q14142 442 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RTP2Q5QGT7 225 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DDX53Q86TM3 631 aaKnown RBP12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CEP57Q86XR8 500 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TMEM86AQ8N2M4 240 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 IQCDQ96DY2 449 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TWNKQ96RR1 684 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TGS1Q96RS0 853 aaKnown RBP12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RTP3Q9BQQ7 232 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PLVAPQ9BX97 442 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CNTN6Q9UQ52 1028 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RWDD3Q9Y3V2 267 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PCDHB4Q9Y5E5 795 aa12.99□□□□□ -0.33
TRAF3IP2-211ENST00000528599 VWA8A3KMH1 1905 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TSC2P49815 1807 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 TMEM265A0A087WTH1 108 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 LRRC53A6NM62 1247 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RFXAPO00287 272 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SYN3O14994 580 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CILPO75339 1184 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SOD2P04179 222 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 LMO2P25791 158 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 GNL1P36915 607 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 NDST1P52848 882 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ADKP55263 362 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ZBED6P86452 979 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ORC1Q13415 861 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 E4F1Q66K89 784 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PDXDC1Q6P996 788 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 FAM71AQ8IYT1 594 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 OR6B3Q8NGW1 331 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SPAG5Q96R06 1193 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ELOVL4Q9GZR5 314 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ALG13Q9NP73 1137 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CHST7Q9NS84 486 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 DSEQ9UL01 958 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 BARX2Q9UMQ3 279 aaPredicted RBP12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ZKSCAN5Q9Y2L8 839 aa12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 LUC7L2Q9Y383 392 aaKnown RBP12.98□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ARHGEF37A1IGU5 675 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 MFAP3LO75121 409 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 OAZ2O95190 189 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 CALCAP01258 141 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RB1P06400 928 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 PDGFRBP09619 1106 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 KRT5P13647 590 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 KRT9P35527 623 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 SOX5P35711 763 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 USP8P40818 1118 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 ZNF132P52740 706 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 RAD23BP54727 409 aa12.97□□□□□ -0.33
TRAF3IP2-211ENST00000528599 YWHAEP62258 255 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms