RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 BIRC3Q13489 604 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 CEP135Q66GS9 1140 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 RTL10Q7L3V2 364 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 CBWD2Q8IUF1 395 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 SIX5Q8N196 739 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 XXYLT1Q8NBI6 393 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 TTC16Q8NEE8 873 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 ZSWIM2Q8NEG5 633 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 ITFG1Q8TB96 612 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 FGF13Q92913 245 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 KCNN1Q92952 543 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 NXPE3Q969Y0 559 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 PAGE5Q96GU1 130 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 KXD1Q9BQD3 176 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 AGPAT3Q9NRZ7 376 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 EPS15L1Q9UBC2 864 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 DNMT3BQ9UBC3 853 aaKnown RBP9.78□□□□□ -0.84
CMTM1-210ENST00000528441 ITGA11Q9UKX5 1188 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 STYXL1Q9Y6J8 313 aa9.78□□□□□ -0.84
CMTM1-210ENST00000528441 ZFP37Q9Y6Q3 630 aaPredicted RBP9.78□□□□□ -0.84
CMTM1-210ENST00000528441 C5orf42Q9H799 3197 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 PVALEFA0A1B0GWK0 134 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 MTMR11A4FU01 709 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 PIRO00625 290 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 DPYSL4O14531 572 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 CALUO43852 315 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-210ENST00000528441 SEC24AO95486 1093 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 PDGFBP01127 241 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-210ENST00000528441 CEBPBP17676 345 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 CMA1P23946 247 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 EMP3P54852 163 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 TNNC1P63316 161 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 POU5F1Q01860 360 aaKnown RBP9.77□□□□□ -0.85
CMTM1-210ENST00000528441 MYBPC2Q14324 1141 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 ZBTB6Q15916 424 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 SNRNP35Q16560 246 aaKnown RBP9.77□□□□□ -0.85
CMTM1-210ENST00000528441 DUOXA2Q1HG44 320 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 ARHGAP15Q53QZ3 475 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 WSCD1Q658N2 575 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 CRELD2Q6UXH1 353 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-210ENST00000528441 ITIH5Q86UX2 942 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 YAF2Q8IY57 180 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 TCEAL8Q8IYN2 117 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 ADGRF2Q8IZF7 708 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 GOLGA5Q8TBA6 731 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 TMEM209Q96SK2 561 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 RHOBTB2Q9BYZ6 727 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 ATXN3LQ9H3M9 355 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 DDX43Q9NXZ2 648 aaKnown RBP9.77□□□□□ -0.85
CMTM1-210ENST00000528441 MAGED2Q9UNF1 606 aaPredicted RBP9.77□□□□□ -0.85
CMTM1-210ENST00000528441 SCN1AP35498 2009 aa9.77□□□□□ -0.85
CMTM1-210ENST00000528441 SPTLC1O15269 473 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 N4BP1O75113 896 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 SOAT2O75908 522 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 ABLIM3O94929 683 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 OAZ2O95190 189 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 SRFP11831 508 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 GJA1P17302 382 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 ACAT1P24752 427 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 TUFMP49411 452 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 NDUFA8P51970 172 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 VCPP55072 806 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 PSMD2Q13200 908 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 GPR17Q13304 367 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 MRPL58Q14197 206 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 KNOP1Q1ED39 458 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 PARM1Q6UWI2 310 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 SPATA2LQ8IUW3 424 aaPredicted RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 WDR49Q8IV35 697 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 SCN4BQ8IWT1 228 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 NPAS3Q8IXF0 933 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 LRRC52Q8N7C0 313 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 C1orf127Q8N9H9 656 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 ATAD1Q8NBU5 361 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 LEMD2Q8NC56 503 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 ZNF507Q8TCN5 953 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 GPR152Q8TDT2 470 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 GIPC2Q8TF65 315 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 SCFD1Q8WVM8 642 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 HPDLQ96IR7 371 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 FAM84AQ96KN4 292 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 PRRX2Q99811 253 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 STRA6Q9BX79 667 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 SNX25Q9H3E2 840 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 MMRN2Q9H8L6 949 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 HOOK1Q9UJC3 728 aaKnown RBP9.76□□□□□ -0.85
CMTM1-210ENST00000528441 MAFFQ9ULX9 164 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 FRMD4BQ9Y2L6 1034 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 PCDHB5Q9Y5E4 795 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 DOCK6Q96HP0 2047 aa9.76□□□□□ -0.85
CMTM1-210ENST00000528441 TECTAO75443 2155 aa9.75□□□□□ -0.85
CMTM1-210ENST00000528441 TSC2P49815 1807 aa9.75□□□□□ -0.85
CMTM1-210ENST00000528441 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
CMTM1-210ENST00000528441 ANO9A1A5B4 782 aa9.75□□□□□ -0.85
CMTM1-210ENST00000528441 ACTN4O43707 911 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms