RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ZMYM5Q9UJ78 669 aa15.32■□□□□ 0.04
CAPN1-212ENST00000527887 A0A087X0B3 334 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 WEE1P30291 646 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 VEPH1Q14D04 833 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 SURF1Q15526 300 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 C1orf228Q6PIY5 440 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 POTEHQ6S545 545 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 FRMD5Q7Z6J6 570 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 DNAJB7Q7Z6W7 309 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-212ENST00000527887 TMC8Q8IU68 726 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 MFSD6LQ8IWD5 586 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 TMEM130Q8N3G9 435 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 LRRC52Q8N7C0 313 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 PDILTQ8N807 584 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 SHKBP1Q8TBC3 707 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 ZSCAN18Q8TBC5 510 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-212ENST00000527887 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 FOXQ1Q9C009 403 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 DNAJC25Q9H1X3 360 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 CRISPLD1Q9H336 500 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 KIAA1586Q9HCI6 787 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 LTB4R2Q9NPC1 389 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 ITGA11Q9UKX5 1188 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 SLC27A5Q9Y2P5 690 aa15.31■□□□□ 0.04
CAPN1-212ENST00000527887 EIF3DO15371 548 aaKnown RBP eCLIP15.3■□□□□ 0.04
CAPN1-212ENST00000527887 HSP90AA1P07900 732 aaKnown RBP15.3■□□□□ 0.04
CAPN1-212ENST00000527887 RPS9P46781 194 aaKnown RBP15.3■□□□□ 0.04
CAPN1-212ENST00000527887 CASP5P51878 434 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 SNRPFP62306 86 aaKnown RBP15.3■□□□□ 0.04
CAPN1-212ENST00000527887 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
CAPN1-212ENST00000527887 UBXN2BQ14CS0 331 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 E2F4Q16254 413 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 NFE2Q16621 373 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-212ENST00000527887 ZNF528Q3MIS6 628 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 SLC39A12Q504Y0 691 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 TPRG1Q6ZUI0 275 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 ASCL5Q7RTU5 278 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 TMEM86AQ8N2M4 240 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 OR10T2Q8NGX3 314 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 CLDN23Q96B33 292 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 MSANTD3Q96H12 275 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 ZSWIM3Q96MP5 696 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 NOTCH4Q99466 2003 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 TRIM9Q9C026 710 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 SLITRK6Q9H5Y7 841 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 GDAP2Q9NXN4 497 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 OBP2AQ9NY56 170 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 TFIP11Q9UBB9 837 aaKnown RBP15.3■□□□□ 0.04
CAPN1-212ENST00000527887 FBXO4Q9UKT5 387 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 CFAP45Q9UL16 551 aa15.3■□□□□ 0.04
CAPN1-212ENST00000527887 R3HCC1Q9Y3T6 440 aaKnown RBP15.3■□□□□ 0.04
CAPN1-212ENST00000527887 PDCD11Q14690 1871 aaKnown RBP15.29■□□□□ 0.04
CAPN1-212ENST00000527887 A0A1W2PRU2 124 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 ZNF233A6NK53 670 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 ZNF263O14978 683 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-212ENST00000527887 RBP5P82980 135 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 TSPY1Q01534 308 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 TEAD2Q15562 447 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 MGAT5BQ3V5L5 792 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 ARHGAP15Q53QZ3 475 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 WSCD1Q658N2 575 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 VITQ6UXI7 678 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 GPD1LQ8N335 351 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 C1orf127Q8N9H9 656 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 SAAL1Q96ER3 474 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 TMEM209Q96SK2 561 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 C7orf25Q9BPX7 421 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 ACBD6Q9BR61 282 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 CBWD1Q9BRT8 395 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 IER2Q9BTL4 223 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 ZNF334Q9HCZ1 680 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-212ENST00000527887 HEBP1Q9NRV9 189 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 CHMP5Q9NZZ3 219 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 DOCK6Q96HP0 2047 aa15.29■□□□□ 0.04
CAPN1-212ENST00000527887 RIF1Q5UIP0 2472 aaKnown RBP15.28■□□□□ 0.04
CAPN1-212ENST00000527887 CFAP54Q96N23 3096 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 SOBPA7XYQ1 873 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 HEPACAM2A8MVW5 462 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 CHADO15335 359 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 LAMTOR5O43504 91 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 HUS1O60921 280 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 PRPF6O94906 941 aaKnown RBP15.28■□□□□ 0.04
CAPN1-212ENST00000527887 ITGB3P05106 788 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 SP9P0CG40 484 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 CDC25CP30307 473 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 POLR2BP30876 1174 aaKnown RBP15.28■□□□□ 0.04
CAPN1-212ENST00000527887 GDI1P31150 447 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 TAF12Q16514 161 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 MAMSTRQ6ZN01 415 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 DPH6Q7L8W6 267 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 CSGALNACT2Q8N6G5 542 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 ZNF507Q8TCN5 953 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 LEO1Q8WVC0 666 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-212ENST00000527887 ANKRD36BP1Q96IX9 119 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 GCNAQ96QF7 691 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 ATXN3LQ9H3M9 355 aa15.28■□□□□ 0.04
CAPN1-212ENST00000527887 FAM13BQ9NYF5 915 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms