RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 SPAG17Q6Q759 2223 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 C4orf47A7E2U8 309 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 LACTBL1A8MY62 500 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 SYN3O14994 580 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 POU2F2P09086 479 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 TDGF1P13385 188 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 PSMC3P17980 439 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 MUTP22033 750 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 PROZP22891 400 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 CCR3P51677 355 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 KPNA1P52294 538 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-210ENST00000527699 DUSP4Q13115 394 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 PDIA5Q14554 519 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 NOLC1Q14978 699 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN1-210ENST00000527699 DTHD1Q6ZMT9 781 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 Q6ZS52 159 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 IGSF22Q8N9C0 903 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 STKLD1Q8NE28 680 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 APPL2Q8NEU8 664 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 SMARCD2Q92925 531 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 EDEM2Q9BV94 578 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 SMG9Q9H0W8 520 aaKnown RBP10.78□□□□□ -0.68
CAPN1-210ENST00000527699 ZHX3Q9H4I2 956 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 C2orf42Q9NWW7 574 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 AFF4Q9UHB7 1163 aaKnown RBP10.78□□□□□ -0.68
CAPN1-210ENST00000527699 ACACAQ13085 2346 aa10.78□□□□□ -0.68
CAPN1-210ENST00000527699 PIEZO2Q9H5I5 2752 aa10.77□□□□□ -0.68
CAPN1-210ENST00000527699 TEP1Q99973 2627 aaKnown RBP10.77□□□□□ -0.68
CAPN1-210ENST00000527699 VWA3AA6NCI4 1184 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 J3QKU1 62 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 MAPTP10636 758 aaKnown RBP10.77□□□□□ -0.69
CAPN1-210ENST00000527699 PLS3P13797 630 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 RPL9P32969 192 aaKnown RBP10.77□□□□□ -0.69
CAPN1-210ENST00000527699 CNR2P34972 360 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 CYP4F8P98187 520 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 YWHAHQ04917 246 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-210ENST00000527699 ORC2Q13416 577 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-210ENST00000527699 GAS6Q14393 721 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 USP37Q86T82 979 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 MAP4K3Q8IVH8 894 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 ATAD1Q8NBU5 361 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 TMEM161BQ8NDZ6 487 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 TTC16Q8NEE8 873 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 FAM200AQ8TCP9 573 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 CSGALNACT1Q8TDX6 532 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 GIPC2Q8TF65 315 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 DNASE1L2Q92874 299 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 IRF7Q92985 503 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 LPIN3Q9BQK8 851 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 LLPHQ9BRT6 129 aaKnown RBP10.77□□□□□ -0.69
CAPN1-210ENST00000527699 RAB34Q9BZG1 259 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 DNAJC25Q9H1X3 360 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 ATXN3LQ9H3M9 355 aa10.77□□□□□ -0.69
CAPN1-210ENST00000527699 AVENQ9NQS1 362 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-210ENST00000527699 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-210ENST00000527699 TISP43B9A030 160 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 MAN2B1O00754 1011 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 DPYSL4O14531 572 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 CLDN3O15551 220 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 TOM1L1O75674 476 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 PLA2G4BP0C869 781 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 U2AF2P26368 475 aaKnown RBP eCLIP10.76□□□□□ -0.69
CAPN1-210ENST00000527699 CXCL12P48061 93 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 TRAPPC10P48553 1259 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 PXNP49023 591 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-210ENST00000527699 LIG4P49917 911 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 HMGN5P82970 282 aaKnown RBP10.76□□□□□ -0.69
CAPN1-210ENST00000527699 TNK2Q07912 1038 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 PON2Q15165 354 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 WDR44Q5JSH3 913 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 GPR158Q5T848 1215 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 TPGS2Q68CL5 300 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 JADE1Q6IE81 842 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 TXNDC11Q6PKC3 985 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 ZNF687Q8N1G0 1237 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 CDK5RAP3Q96JB5 506 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 LRRC3BQ96PB8 259 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 SEPT5Q99719 369 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-210ENST00000527699 IKZF4Q9H2S9 585 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 CHRDQ9H2X0 955 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.76□□□□□ -0.69
CAPN1-210ENST00000527699 POLR3BQ9NW08 1133 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-210ENST00000527699 GTSE1Q9NYZ3 720 aa10.76□□□□□ -0.69
CAPN1-210ENST00000527699 K7ENM7 598 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 CHRNB1P11230 501 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 CEACAM1P13688 526 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 GUCY2CP25092 1073 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 GABRR2P28476 465 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 ALDH1A3P47895 512 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 SMTNP53814 917 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 EPHB3P54753 998 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 SLC12A3P55017 1021 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 PPP2R3AQ06190 1150 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 MCL1Q07820 350 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 ENOX2Q16206 610 aaKnown RBP10.75□□□□□ -0.69
CAPN1-210ENST00000527699 SLC39A12Q504Y0 691 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 ARSHQ5FYA8 562 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 OVOS1Q6IE37 1185 aa10.75□□□□□ -0.69
CAPN1-210ENST00000527699 TCEAL6Q6IPX3 200 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms