RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 OVOS1Q6IE37 1185 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 KIAA1841Q6NSI8 718 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 TMC7Q7Z402 723 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 METTL23Q86XA0 190 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 OR6B3Q8NGW1 331 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 BCO2Q9BYV7 579 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 GRPEL1Q9HAV7 217 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 NLRC4Q9NPP4 1024 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 TLR9Q9NR96 1032 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 HMGXB4Q9UGU5 601 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 PUF60Q9UHX1 559 aaKnown RBP14.68□□□□□ -0.06
CD44-224ENST00000526669 DNAJC12Q9UKB3 198 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 NME7Q9Y5B8 376 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 PATJQ8NI35 1801 aa14.68□□□□□ -0.06
CD44-224ENST00000526669 C2orf16Q68DN1 1984 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 FSD2A1L4K1 749 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 NOL4O94818 638 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 CYP11A1P05108 521 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 PDGFRBP09619 1106 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 PNMA6AP0CW24 399 aaPredicted RBP14.67□□□□□ -0.06
CD44-224ENST00000526669 TYMPP19971 482 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 PBX1P40424 430 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 POLR2FP61218 127 aaKnown RBP14.67□□□□□ -0.06
CD44-224ENST00000526669 YWHAHQ04917 246 aaPredicted RBP14.67□□□□□ -0.06
CD44-224ENST00000526669 PSMD5Q16401 504 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 TMEM209Q96SK2 561 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 TCF25Q9BQ70 676 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 SNX25Q9H3E2 840 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 PRDM12Q9H4Q4 367 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 DDX43Q9NXZ2 648 aaKnown RBP14.67□□□□□ -0.06
CD44-224ENST00000526669 LZTS1Q9Y250 596 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 PCDHB4Q9Y5E5 795 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 CDH23Q9H251 3354 aa14.67□□□□□ -0.06
CD44-224ENST00000526669 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.66□□□□□ -0.06
CD44-224ENST00000526669 A0A1W2PQC6 194 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 ARHGEF37A1IGU5 675 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CXCL14O95715 111 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CALCAP01258 141 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 OR4Q2P0C623 313 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CTSAP10619 480 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 WARSP23381 471 aaKnown RBP14.66□□□□□ -0.06
CD44-224ENST00000526669 PAX3P23760 479 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 TBXAS1P24557 533 aaPredicted RBP14.66□□□□□ -0.06
CD44-224ENST00000526669 LMO2P25791 158 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 NDST1P52848 882 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 ARPP19P56211 112 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 DSG1Q02413 1049 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 UBE3AQ05086 875 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CAMK1Q14012 370 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 PTPN14Q15678 1187 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CCDC142Q17RM4 750 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CTXN3Q4LDR2 81 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 ZNF394Q53GI3 561 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 HABP4Q5JVS0 413 aaKnown RBP14.66□□□□□ -0.06
CD44-224ENST00000526669 ZNF697Q5TEC3 545 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 KIAA0319Q5VV43 1072 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 ZNF280DQ6N043 979 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 RSPO2Q6UXX9 243 aaPredicted RBP14.66□□□□□ -0.06
CD44-224ENST00000526669 TMC6Q7Z403 805 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 LIMS2Q7Z4I7 341 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 TMEM86AQ8N2M4 240 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 LNX1Q8TBB1 728 aaPredicted RBP14.66□□□□□ -0.06
CD44-224ENST00000526669 MICAL1Q8TDZ2 1067 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 TWNKQ96RR1 684 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 LPIN3Q9BQK8 851 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 RTP3Q9BQQ7 232 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 DPEP3Q9H4B8 488 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CYP3A43Q9HB55 503 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 PLCB1Q9NQ66 1216 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CHST7Q9NS84 486 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 CISHQ9NSE2 258 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 DSEQ9UL01 958 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 DENND4CQ5VZ89 1909 aa14.66□□□□□ -0.06
CD44-224ENST00000526669 HIDE1A8MVS5 230 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 A8MXQ7 604 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 FSCN2O14926 492 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 ADAM12O43184 909 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 LPXNO60711 386 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 TACC1O75410 805 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 ADCY5O95622 1261 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 KRT5P13647 590 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 UCHL3P15374 230 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 TRIM21P19474 475 aaKnown RBP14.65□□□□□ -0.06
CD44-224ENST00000526669 GNL1P36915 607 aaPredicted RBP14.65□□□□□ -0.06
CD44-224ENST00000526669 USP8P40818 1118 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 MFAP3P55082 362 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 PSMC1P62191 440 aaKnown RBP14.65□□□□□ -0.06
CD44-224ENST00000526669 GCNT1Q02742 428 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 SMC1AQ14683 1233 aaKnown RBP14.65□□□□□ -0.06
CD44-224ENST00000526669 GRIN2CQ14957 1233 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 Q7L0L9 218 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 DPH6Q7L8W6 267 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 VSTM4Q8IW00 320 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 THEM5Q8N1Q8 247 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 UBR7Q8N806 425 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 OR10T2Q8NGX3 314 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 CPLX3Q8WVH0 158 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 PIK3R5Q8WYR1 880 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 SYT15Q9BQS2 421 aa14.65□□□□□ -0.06
CD44-224ENST00000526669 ELOVL4Q9GZR5 314 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms