RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 PON2Q15165 354 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 SPATA1Q5VX52 437 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 HEATR6Q6AI08 1181 aaKnown RBP15.51■□□□□ 0.07
CPSF1-201ENST00000526271 JADE1Q6IE81 842 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 DTHD1Q6ZMT9 781 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 PRR23BQ6ZRT6 265 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 HAUS6Q7Z4H7 955 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 ELMOD1Q8N336 334 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 PSMG2Q969U7 264 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 FAM84AQ96KN4 292 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 SENP8Q96LD8 212 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 REEP2Q9BRK0 252 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 TIPINQ9BVW5 301 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 SLC46A2Q9BY10 475 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 BACH2Q9BYV9 841 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 SEMA4GQ9NTN9 838 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 GMEB2Q9UKD1 530 aa15.51■□□□□ 0.07
CPSF1-201ENST00000526271 CPSF3Q9UKF6 684 aaKnown RBP15.51■□□□□ 0.07
CPSF1-201ENST00000526271 ASPMQ8IZT6 3477 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 A0A0B4J269 797 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-201ENST00000526271 OR6C75A6NL08 312 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 LAD1O00515 517 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 CD2BP2O95400 341 aaKnown RBP15.5■□□□□ 0.07
CPSF1-201ENST00000526271 GABRR2P28476 465 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 MARCKSP29966 332 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-201ENST00000526271 STRN3Q13033 797 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 SIM2Q14190 667 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-201ENST00000526271 MYBPC2Q14324 1141 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 CCDC142Q17RM4 750 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 GPR158Q5T848 1215 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 C9orf57Q5W0N0 161 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 OVOS1Q6IE37 1185 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 PRR23CQ6ZRP0 262 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 FAM160A2Q8N612 972 aaPredicted RBP15.5■□□□□ 0.07
CPSF1-201ENST00000526271 SLITRK6Q9H5Y7 841 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 FBRSL1Q9HCM7 1045 aaKnown RBP15.5■□□□□ 0.07
CPSF1-201ENST00000526271 HPS4Q9NQG7 708 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 TMLHEQ9NVH6 421 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 TBX20Q9UMR3 447 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 CCL26Q9Y258 94 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 ZZEF1O43149 2961 aa15.5■□□□□ 0.07
CPSF1-201ENST00000526271 VWA3AA6NCI4 1184 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 ANTXRLA6NF34 631 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 TM4SF5O14894 197 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 CYP11A1P05108 521 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 HMGA1P17096 107 aaKnown RBP15.49■□□□□ 0.07
CPSF1-201ENST00000526271 FSTL4Q6MZW2 842 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 CRELD2Q6UXH1 353 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-201ENST00000526271 LONP2Q86WA8 852 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 EFCAB13Q8IY85 973 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 FAM184AQ8NB25 1140 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 ZSWIM2Q8NEG5 633 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 EZH1Q92800 747 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-201ENST00000526271 FAM83CQ9BQN1 747 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 GPR88Q9GZN0 384 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 ZCWPW1Q9H0M4 648 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 ATXN3LQ9H3M9 355 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 C8orf33Q9H7E9 229 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-201ENST00000526271 STK24Q9Y6E0 443 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 PTPRDP23468 1912 aa15.49■□□□□ 0.07
CPSF1-201ENST00000526271 OGTO15294 1046 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 TADA3O75528 432 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 WEE1P30291 646 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 NMT1P30419 496 aaKnown RBP15.48■□□□□ 0.07
CPSF1-201ENST00000526271 PXNP49023 591 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-201ENST00000526271 GPR15P49685 360 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 EPHB3P54753 998 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 NRLP54845 237 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 PPP2R3AQ06190 1150 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 GNL2Q13823 731 aaKnown RBP15.48■□□□□ 0.07
CPSF1-201ENST00000526271 CCDC6Q16204 474 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 CSRP2Q16527 193 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 PPM1JQ5JR12 505 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 TRIM68Q6AZZ1 485 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 DSTYKQ6XUX3 929 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 ABCA7Q8IZY2 2146 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 NETO1Q8TDF5 533 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 CSGALNACT1Q8TDX6 532 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 ZSCAN31Q96LW9 406 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-201ENST00000526271 RAB34Q9BZG1 259 aa15.48■□□□□ 0.07
CPSF1-201ENST00000526271 SH2B1Q9NRF2 756 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-201ENST00000526271 LRP3O75074 770 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 HOXA6P31267 233 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 KPNA1P52294 538 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-201ENST00000526271 PLD1Q13393 1074 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 SF3A2Q15428 464 aaKnown RBP15.47■□□□□ 0.07
CPSF1-201ENST00000526271 SLC39A12Q504Y0 691 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 ZC2HC1CQ53FD0 456 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-201ENST00000526271 WDR5BQ86VZ2 330 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 RALGPS2Q86X27 583 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-201ENST00000526271 GIPC2Q8TF65 315 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 SECISBP2LQ93073 1101 aaKnown RBP15.47■□□□□ 0.07
CPSF1-201ENST00000526271 E2F7Q96AV8 911 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 MSANTD3Q96H12 275 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 SMOC1Q9H4F8 434 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 TASP1Q9H6P5 420 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 OBP2AQ9NY56 170 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 ASB3Q9Y575 518 aa15.47■□□□□ 0.07
CPSF1-201ENST00000526271 AKAP13Q12802 2813 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms