RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 TRIML1Q8N9V2 468 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 XXYLT1Q8NBI6 393 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 FAM212AQ96EL1 285 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 KIF12Q96FN5 646 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 ZMAT2Q96NC0 199 aaKnown RBP10.95□□□□□ -0.66
VPS28-204ENST00000526054 KCTD10Q9H3F6 313 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 SEMA4AQ9H3S1 761 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 ASB7Q9H672 318 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 RBAKQ9NYW8 714 aaPredicted RBP10.95□□□□□ -0.66
VPS28-204ENST00000526054 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 UBQLN1Q9UMX0 589 aaKnown RBP10.95□□□□□ -0.66
VPS28-204ENST00000526054 MAPK8IP1Q9UQF2 711 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 DERAQ9Y315 318 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 GVINP1Q7Z2Y8 2422 aa10.95□□□□□ -0.66
VPS28-204ENST00000526054 ARHGEF37A1IGU5 675 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 WDR27A2RRH5 827 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 GOLGA8IPA6NC78 632 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 ZNF233A6NK53 670 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 GOLGA8JA6NMD2 632 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 LACTBL1A8MY62 500 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 H7C4K7 107 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 PSMA7O14818 248 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 SYN3O14994 580 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 EXOC3O60645 756 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 LRRN2O75325 713 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 NR3C1P04150 777 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 ADRB2P07550 413 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 SP9P0CG40 484 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 GLULP15104 373 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 PTMSP20962 102 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 MCM4P33991 863 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 ARPP19P56211 112 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 FOXK2Q01167 660 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 PRKCQQ04759 706 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 MYBPC2Q14324 1141 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 TMEM132DQ14C87 1099 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 UBXN2BQ14CS0 331 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 SURF1Q15526 300 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 SLC5A9Q2M3M2 681 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 ZNF280DQ6N043 979 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 CRELD2Q6UXH1 353 aaPredicted RBP10.94□□□□□ -0.66
VPS28-204ENST00000526054 NT5DC4Q86YG4 428 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 SMYD4Q8IYR2 804 aaPredicted RBP10.94□□□□□ -0.66
VPS28-204ENST00000526054 ZNF461Q8TAF7 563 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 GPT2Q8TD30 523 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 TSG101Q99816 390 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 HINFPQ9BQA5 517 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 BCO2Q9BYV7 579 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 CYP4F11Q9HBI6 524 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 GDE1Q9NZC3 331 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 TRAF3IP3Q9Y228 551 aa10.94□□□□□ -0.66
VPS28-204ENST00000526054 DMXL1Q9Y485 3027 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 EP300Q09472 2414 aaPredicted RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 BIN1O00499 593 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 MEFVO15553 781 aaPredicted RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 ECI2O75521 394 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 ATF2P15336 505 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 CEBPBP17676 345 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 PTPN2P17706 415 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 CYP3A5P20815 502 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 RPL13P26373 211 aaKnown RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 RPL9P32969 192 aaKnown RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 PRCPP42785 496 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 ID4P47928 161 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 SPAG1Q07617 926 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 MORC3Q14149 939 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 SNRNP35Q16560 246 aaKnown RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 NFIL3Q16649 462 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 CTXN3Q4LDR2 81 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 SLC44A4Q53GD3 710 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 JADE1Q6IE81 842 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 TPRG1Q6ZUI0 275 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 BEST2Q8NFU1 509 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 TMEM174Q8WUU8 243 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 C18orf25Q96B23 403 aaPredicted RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 MCRS1Q96EZ8 462 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 CORO1BQ9BR76 489 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 DDX23Q9BUQ8 820 aaKnown RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 LTB4R2Q9NPC1 389 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 AVENQ9NQS1 362 aaPredicted RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 SPATA6Q9NWH7 488 aaPredicted RBP10.93□□□□□ -0.66
VPS28-204ENST00000526054 TUBGCP4Q9UGJ1 667 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 FBXL5Q9UKA1 691 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 C2CD2Q9Y426 696 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 INSL5Q9Y5Q6 135 aa10.93□□□□□ -0.66
VPS28-204ENST00000526054 COL4A2P08572 1712 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 CACNA1IQ9P0X4 2223 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 TICRRQ7Z2Z1 1910 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 FRYLO94915 3013 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 LAMTOR5O43504 91 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 ABLIM3O94929 683 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 NFICP08651 508 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 CPB1P15086 417 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 NR2F2P24468 414 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 LRPAP1P30533 357 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 LRRC63Q05C16 580 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 EDRF1Q3B7T1 1238 aa10.92□□□□□ -0.66
VPS28-204ENST00000526054 ZCWPW2Q504Y3 356 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms